ZFIN Sequences for Gene: hoxb3a

ZFIN ID: ZDB-GENE-990415-104

ZFIN ID: ZDB-GENE-990415-104

SEQUENCE INFORMATION

Gene Name:	homeobox B3a
Gene Symbol:	hoxb3a

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_131117 (1)	2107 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005171562 (1)	4018 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_017353138 (1)	3506 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_017353143 (1)	3361 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_021469307 (1)	3215 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_021469305 (1)	3212 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_068215741 (1)	3207 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_005171554 (1)	3136 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_021469306 (1)	3101 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_073935805 (1)	3044 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_017353141 (1)	2945 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_017353140 (1)	2914 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_068215740 (1)	2854 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01007178 (1)	2983 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC095559 (1)	2107 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BK005082 (1)	1728 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BK005081 (1)	1646 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AJ537509 (1)	1254 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	WashUZ:wz12367	908 nt
	GenBank:BG985530 (1)	842 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BG985531 (1)	746 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:Y13944 (1)	633 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI723185 (1)	529 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:BX927395	152987 nt	Select Tool MegaBLAST Ensembl
	GenBank:AL645782 (1)	119385 nt	Select Tool MegaBLAST Ensembl
	GenBank:CR751227 (2)	114387 nt	Select Tool MegaBLAST Ensembl
	GenBank:BX927395 (1)	103062 nt	Select Tool MegaBLAST Ensembl
	GenBank:BK006732 (1)	247 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:BK006730 (1)	228 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:JBMGRA010000003 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:A0A8M9P483 (1)	417 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:O42368 (1)	417 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_571192 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005171611 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_005171619 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017208627 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017208629 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017208630 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_017208632 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021324980 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021324981 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021324982 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_068071841 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_068071842 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_073791906 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH95559 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAD59116 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAD61096 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:DAA05213 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:DAA05214 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:O42368 (1)	417 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAA74282 (1)	210 aa	Select Tool ZFIN BLAST NCBI BLAST

hoxb3a CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH211-72A16 (1)	Genomic	GenBank:BX927395	152987	Select Tool MegaBLAST Ensembl
[BAC] DKEY-178D9 (1)	Genomic	GenBank:CR751227	114387	Select Tool MegaBLAST Ensembl
[PAC] BUSM1-254O17 (3)	Genomic	GenBank:AL645782	119385	Select Tool MegaBLAST Ensembl

hoxb3a ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:111819 (1)	RNA	GenBank:BC095559	2107	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fc33f11 (1)	RNA	WashUZ:wz12367	908
	RNA	GenBank:AI723185	529	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] ibd3053 (2)	RNA	GenBank:BG985530	842	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:BG985531	746	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT