ZFIN Sequences for Gene: pcf11

ZFIN ID: ZDB-GENE-041114-175

SEQUENCE INFORMATION

Gene Name:	PCF11 cleavage and polyadenylation factor subunit
Gene Symbol:	pcf11

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_001007307 (1)	4982 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GDQH01001088 (1)	7113 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC085652 (1)	4982 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC155306 (1)	1279 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK677779 (1)	615 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI882898 (1)	548 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CK674986 (1)	460 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AI793416 (1)	430 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01029665 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl UCSC BLAT
Genomic	GenBank:AL627325 (1)	163882 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU928848 (2)	61541 nt	Select Tool MegaBLAST Ensembl
	GenBank:JBMGRA010000021 (1)		Select Tool ZFIN BLAST NCBI BLAST MegaBLAST Ensembl
Polypeptide	UniProtKB:Q5U393 (1)	1457 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_001007308 (1)	1457 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH85652 (1)	1457 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:CAE47761 (1)	1420 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI55307 (1)	83 aa	Select Tool ZFIN BLAST NCBI BLAST

pcf11 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-115D3 (1)	Genomic	GenBank:CU928848	61541	Select Tool MegaBLAST Ensembl
[BAC] RP71-1P14 (1)	Genomic	GenBank:AL627325	163882	Select Tool MegaBLAST Ensembl

pcf11 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:92226 (1)	RNA	GenBank:BC085652	4982	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:175013 (1)	RNA	GenBank:BC155306	1279	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	Polypeptide	GenPept:AAI55307	83	Select Tool ZFIN BLAST NCBI BLAST
[EST] fc47a05 (3)	RNA	GenBank:AI882898	548	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AI793416	430	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] IMAGE:6912257 (1)	RNA	GenBank:CK674986	460	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] IMAGE:7138745 (1)	RNA	GenBank:CK677779	615	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT