ZFIN Sequences for Gene: pak1

ZFIN ID: ZDB-GENE-030826-29

ZFIN ID: ZDB-GENE-030826-29

SEQUENCE INFORMATION

Gene Name:	p21 protein (Cdc42/Rac)-activated kinase 1
Gene Symbol:	pak1

SEQUENCE INFORMATION

Type	Accession #	Length (nt/aa)	Analysis
RNA	RefSeq:NM_201328 (1)	2811 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_021467598 (1)	2746 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RefSeq:XM_021467599 (1)	2721 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:GFIL01029377 (1)	2882 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC044138 (1)	2811 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC065603 (1)	2802 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:BC165171 (1)	1801 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW127776 (1)	711 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:AW115607 (1)	613 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	GenBank:CF269264 (1)	393 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
Genomic	GenBank:CU459145	196166 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU459145 (2)	191629 nt	Select Tool MegaBLAST Ensembl
	GenBank:LO018401 (1)	161567 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU570791	141786 nt	Select Tool MegaBLAST Ensembl
	GenBank:CABZ01002685 (1)	52537 nt	Select Tool MegaBLAST Ensembl
	GenBank:LO018362 (1)	34803 nt	Select Tool MegaBLAST Ensembl
	GenBank:CU855623 (2)	24904 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CR352290 (1)	21265 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01002681 (1)	19549 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01002684 (1)	17524 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01002683 (1)	14748 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
	GenBank:CABZ01002682 (1)	5798 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl
Polypeptide	UniProtKB:A0A8M9P9X9 (1)	587 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:A0A8M9PFA6 (1)	579 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	UniProtKB:Q803Z0 (1)	577 aa	Select Tool ZFIN BLAST SIB BLAST Ensembl Protein Blast
	RefSeq:NP_958485 (1)	577 aa	Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021323273 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	RefSeq:XP_021323274 (1)		Select Tool ZFIN BLAST NCBI BLAST UCSC BLAT Ensembl Protein Blast
	GenPept:AAH44138 (1)	577 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAH65603 (1)	577 aa	Select Tool ZFIN BLAST NCBI BLAST
	GenPept:AAI65171 (1)	577 aa	Select Tool ZFIN BLAST NCBI BLAST

pak1 CONTAINED IN

Marker	Type	Accession #	Length (nt/aa)	Analysis
[BAC] CH73-39G20 (1)	Genomic	GenBank:CU570791	141786	Select Tool MegaBLAST Ensembl
[BAC] CH73-293K19 (1)	Genomic	GenBank:CU855623	24904	Select Tool ZFIN BLAST NCBI BLAST Ensembl
[BAC] CH211-135H6 (1)	Genomic	GenBank:CU459145	196166	Select Tool MegaBLAST Ensembl

pak1 ENCODES

Marker	Type	Accession #	Length (nt/aa)	Analysis
[CDNA] MGC:55281 (2)	RNA	GenBank:BC044138	2811	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:77309 (1)	RNA	GenBank:BC065603	2802	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[CDNA] MGC:193033 (1)	RNA	GenBank:BC165171	1801	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] cb761 (1)	RNA	GenBank:CF269264	393	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
[EST] fj97h10 (2)	RNA	GenBank:AW127776	711	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
	RNA	GenBank:AW115607	613	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT