Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
19	35.0 cM	z3782	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
19	33.7 cM	z3782	Mother of Pearl (MOP)	Postlethwait, John H.	Data
19	97.69 cR	Z3782	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
19	811.0 cR	z3782	Goodfellow T51 (T51)	Geisler, Robert	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z4825	SSLP	19		Huang et al., 2009	Huang et al.(2009, Dev. Biol. 332(2): 360-3700 mapped prp to Chr 19 using a variety of methods.
z7450	SSLP	19		Huang et al., 2009	Huang et al.(2009, Dev. Biol. 332(2): 360-3700 mapped prp to Chr 19 using a variety of methods.
z40343	SSLP	19		Huang et al., 2009	Huang et al.(2009, Dev. Biol. 332(2): 360-3700 mapped prp to Chr 19 using a variety of methods.
z7450	SSLP	19		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a3a to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a3a to LG19 between z7450 and z3782 on one or more of the T51, LN54, or Heat Shock mapping panels.
atp1a3a	GENE	19		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a3a to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a3a to LG19 between z7450 and z3782 on one or more of the T51, LN54, or Heat Shock mapping panels.

OTHER MAPPING INFORMATION

Chr 19 Rajarao et al., 2001 Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a3a to LG19 between z7450 and  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a3a to LG19 between z7450 and z3782 on one or more of the T51, LN54, or Heat Shock mapping panels.   Chr 19 Huang et al., 2009 Huang et al.(2009, Dev. Biol. 332(2): 360-3700 mapped prp to Chr 19 using a variety of  ... Huang et al.(2009, Dev. Biol. 332(2): 360-3700 mapped prp to Chr 19 using a variety of methods.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
IND	115,201,143		60.0
Forward Primer	AATTCTGGGGGGTAATTCTGGC
Reverse Primer	AAGGGGGCTAAACCTTCAACTG
AB	201,115,93		60.0
Forward Primer	AATTCTGGGGGGTAATTCTGGC
Reverse Primer	AAGGGGGCTAAACCTTCAACTG
TL	163,115		60.0
Forward Primer	AATTCTGGGGGGTAATTCTGGC
Reverse Primer	AAGGGGGCTAAACCTTCAACTG
TU	161,201,115		60.0
Forward Primer	AATTCTGGGGGGTAATTCTGGC
Reverse Primer	AAGGGGGCTAAACCTTCAACTG