ZFIN ID: ZDB-GENE-990415-272

ZFIN ID: ZDB-GENE-990415-272

Mapping Details

Gene Name:	DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Symbol:	ddx4

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	10	7,390,195 - 7,413,262	GRCz12tu
NCBI Map Viewer	10	7,390,195 - 7,413,262	GRCz12tu
Ensembl	10	6,884,123 - 6,905,574	GRCz11
NCBI Map Viewer	10	6,884,151 - 6,905,574	GRCz11
UCSC	10	-	GRCz11
Vega	10	6,925,423 - 6,946,874	GRCv10

Mapped Clones containing ddx4
DKEY-117I20	Chr: 10 Details
CH73-194F17	Chr: 10 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa6158	10	7,404,287	GRCz12tu	DIRECT		Sealy et al., 2025
	10	6,896,599	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	10	6,937,899	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	10	6,561,271	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa9472	10	7,412,569	GRCz12tu	DIRECT		Sealy et al., 2025
	10	6,904,881	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	10	6,946,181	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	10	6,569,553	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa15900	10	7,400,566	GRCz12tu	DIRECT		Sealy et al., 2025
	10	6,892,878	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	10	6,934,178	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	10	6,557,550	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa18973	10	7,412,569	GRCz12tu	DIRECT		Sealy et al., 2025
	10	6,904,881	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	10	6,946,181	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	10	6,569,553	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa6158	22		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	22		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	10		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa9472	22		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	22		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	10		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sa15900	22		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	22		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	10		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
sa18973	22		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	22		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	10		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	10		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
10	34.5 cM	vasa	Mother of Pearl (MOP)	Postlethwait, John H.	Data
10	29.6 cM	vasa	Heat Shock (HS)	Woods, Ian G.	Data
22	22.96 cM	vasa	Gates et al (GAT)	Talbot, William S.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
fb78a06	EST	10	9.0 cR	Bartfai et al., 2003	Bartfai et al. (2003., DNA and Cell Biology 22:47-54) report mapping vasa to LG10 approximately 9cR from fb78a06 on the T51 mapping panel.
fb78a06	EST	10	3.56 cR	Bartfai et al., 2003	Bartfai et al. (2003., DNA and Cell Biology 22:47-54) report mapping vasa to LG10 approximately 3.56cR from fb78a06 on the LN54 mapping panel.

OTHER MAPPING INFORMATION: No data available