ZFIN ID: ZDB-GENE-980526-322

Mapping Details

Gene Name:	muscle segment homeobox 2a
Symbol:	msx2a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	14	28,350,870 - 28,352,722	GRCz12tu
NCBI Map Viewer	14	28,350,870 - 28,352,722	GRCz12tu
Ensembl	14	24,080,077 - 24,081,929	GRCz11
NCBI Map Viewer	14	24,080,077 - 24,081,929	GRCz11
UCSC	14	-	GRCz11
Vega	14	23,782,832 - 23,784,684	GRCv10

Mapped Clones containing msx2a
DKEY-42A21	Chr: 14 Details
CH211-277C7	Chr: 14 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
la012524Tg	14	25,081,671 - 25,081,681	Zv9	ZFIN_Zv9	BurgessLin
	14		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	14		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
14	89.6 cM	msxa	Mother of Pearl (MOP)	Postlethwait, John H.	Data
14	759.1 cR	msxa	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
14	2946.0 cR	msxa	Goodfellow T51 (T51)	Geisler, Robert	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Primer Sets:
Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
SJD	186		36.0
Forward Primer	GCAGACATATGCTGCCTTTTGCAC
Reverse Primer	GTATGACACCCCATGTTTGGTGTG