ZFIN ID: ZDB-GENE-980526-124

Mapping Details

Gene Name:	ndrg family member 3a
Symbol:	ndrg3a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	11	27,136,481 - 27,211,127	GRCz12tu
NCBI Map Viewer	11	27,136,481 - 27,211,127	GRCz12tu
Ensembl	11	25,064,519 - 25,139,061	GRCz11
NCBI Map Viewer	11	25,064,536 - 25,139,061	GRCz11
UCSC	11	-	GRCz11
Vega	11	24,826,903 - 24,901,445	GRCv10

Mapped Clones containing ndrg3a
CH211-25D12	Chr: 11 Details
CH211-274P22	Chr: 11 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa35087	11	27,194,452	GRCz12tu	DIRECT		Sealy et al., 2025
	11	25,122,422	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	11	24,884,806	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	11	26,055,981	Zv9	DIRECT		Busch-Nentwich et al., 2013
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	5		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
5	250.1 cM	ndr3	Mother of Pearl (MOP)	Postlethwait, John H.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
ephb4a	GENE	5		Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
z34450	SSLP	5		Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
zf232	Feature	5	0.3 cM	Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
pax8	GENE	5		Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
usp39	GENE	5		Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.

Markers Encoded by ndrg3a
MGC:63551 Chr: 5 Details

Primer Sets:
Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
SJD	126,120		36.0
Forward Primer	GTATAGTAGTGTGTATGAGCATCTGG
Reverse Primer	AGCTGACCCGCTC(A/C)GGTT