ZFIN ID: ZDB-GENE-050105-3

Mapping Details

Gene Name: solute carrier family 6 member 9
Symbol: slc6a9
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 2 33,368,414 - 33,422,798 GRCz11
Ensembl 2 33,368,414 - 33,422,798 GRCz11
Vega 2 33,385,196 - 33,439,580 GRCv10
NCBI Map Viewer 2 33,335,941 - 33,422,797 GRCz11
UCSC 2 - GRCv10
Mapped Clones containing slc6a9
CH211-261P7 Chr: 2 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa19804 2 33,411,256 GRCz11 Busch-Nentwich et al., 2013
2 33,428,038 GRCz10 Busch-Nentwich et al., 2013
2 33,129,131 Zv9 Busch-Nentwich et al., 2013
sa19805 2 33,411,732 GRCz11 Busch-Nentwich et al., 2013
2 33,428,514 GRCz10 Busch-Nentwich et al., 2013
2 33,129,607 Zv9 Busch-Nentwich et al., 2013
sa39868 2 33,405,940 GRCz11 Busch-Nentwich et al., 2013
2 33,422,722 GRCz10 Busch-Nentwich et al., 2013
2 33,123,815 Zv9 Busch-Nentwich et al., 2013
la023611Tg 2 33,112,354 - 33,112,364 Zv9

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z22527 SSLP 2 Cui et al., 2005 Cui et al (J. Neurosci, 25:6610-6620) used bulk segregant analysis to map the  ...
z7632 SSLP 2 Cui et al., 2005 Cui et al (J. Neurosci, 25:6610-6620) used bulk segregant analysis to map the  ...
ta229g Feature 2 Cui et al., 2005 Cui et al (J. Neurosci, 25:6610-6620) used bulk segregant analysis to map the  ...

OTHER MAPPING INFORMATION
Chr 2 Cui et al., 2005 Cui et al (J. Neurosci, 25:6610-6620) used bulk segregant analysis to map the sho locus to LG 2.  ...
Genomic Feature ta229g is an allele of slc6a9
Marker Type Chr Distance Publication / Person Comments
z7632 SSLP 2 0.26 cM Cui et al., 2005 Cui et al (J. Neurosci, 25:6610-6620) used bulk segregant analysis to map the  ...
z22527 SSLP 2 0.97 cM Cui et al., 2005 Cui et al (J. Neurosci, 25:6610-6620) used bulk segregant analysis to map the  ...
slc6a9 GENE 2 Cui et al., 2005 Cui et al (J. Neurosci, 25:6610-6620) used bulk segregant analysis to map the  ...
Genomic Feature te301 is an allele of slc6a9
Chr 2 Luna et al., 2004 Luna et al. reported that the sho mutation maps to chromosome 2, and is therefore not a mutation in  ...