ZFIN ID: ZDB-GENE-030616-135

ZFIN ID: ZDB-GENE-030616-135

Mapping Details

Gene Name:	calcium channel, voltage-dependent, L type, alpha 1D subunit, a
Symbol:	cacna1da

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	11	39,143,854 - 39,318,523	GRCz12tu
NCBI Map Viewer	11	39,143,854 - 39,318,523	GRCz12tu
Ensembl	11	36,793,473 - 36,957,127	GRCz11
NCBI Map Viewer	11	36,788,342 - 36,964,153	GRCz11
NCBI Map Viewer	11	36,788,342 - 36,964,153	GRCz11
UCSC	11	-	GRCz11
Vega	11	36,530,848 - 36,696,536	GRCv10

Mapped Clones containing cacna1da
DKEY-93P1	Chr: 11 Details
BUSM1-136D19	Chr: 11 Details
CH211-243C14	Chr: 11 Details
BUSM1-223C6	Chr: 11 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa1422	11	39,208,474	GRCz12tu	DIRECT		Sealy et al., 2025
	11	36,859,091	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	11	36,597,108	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	11	37,699,880	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa17298	11	39,206,992	GRCz12tu	DIRECT		Sealy et al., 2025
	11	36,857,604	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	11	36,595,621	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	11	37,698,393	Zv9	DIRECT		Busch-Nentwich et al., 2013
la017886Tg	11	37,642,870 - 37,642,880	Zv9	ZFIN_Zv9	BurgessLin
tc323d	11		GRCz11	GENERAL_LOAD	load data [singleton]
la017886Tg	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa1422	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa17298	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
tc323d	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	11		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	11		GRCz11	OTHER_MAPPING	linkagesDirectMem1
tn004	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	11		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
cacna2d3	GENE	11	0.15 cM	Sidi et al., 2004	Sidi et al. (2004) used positional cloning to show that exons of the cacna1d ...

Genomic Feature tc323d is an allele of cacna1da

Marker	Type	Chr	Distance	Publication / Person	Comments
z21428	SSLP	11		Sidi et al., 2004	...

Genomic Feature tc323d is an allele of cacna1da

Chr 11

The+gemini+locus+%28allele+tc123d%29+was+mapped+to+within+20+kb+%280%2e03+cM%29+of+SSLP+Z21428%2e++