ZFIN ID: ZDB-GENE-000509-1

Mapping Details

Gene Name: aryl hydrocarbon receptor nuclear translocator-like 1a
Symbol: arntl1a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN Gbrowse 25 17,893,784 - 17,918,810 GRCz11
Ensembl 25 17,893,784 - 17,918,810 GRCz11
Vega 25 17,797,384 - 17,822,410 GRCv10
NCBI Map Viewer 25 17,893,784 - 17,918,860 GRCz11
UCSC 25 - GRCv10
Mapped Clones containing arntl1a
CH211-244M13 Chr: 25 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
ct803 25 17,910,547 - 17,910,607 GRCz11 Chen et al., 2013
sa24645 25 17,907,071 GRCz11 Busch-Nentwich et al., 2013
25 17,810,671 GRCz10 Busch-Nentwich et al., 2013
25 18,394,361 Zv9 Busch-Nentwich et al., 2013
sa38044 25 17,910,814 GRCz11 Busch-Nentwich et al., 2013
25 17,814,414 GRCz10 Busch-Nentwich et al., 2013
25 18,398,104 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
25 246.22 cR bmal1 Loeb/NIH/5000/4000 (LN54) Dawid, Igor B. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z669 SSLP 22 ZFIN Curated Data While investigating arntl1a (bmal1) gene, bmal1 was found on Sanger ctg15465  ...
z11262 SSLP 22 ZFIN Curated Data While investigating arntl1a (bmal1) gene, bmal1 was found on Sanger ctg15465  ...
z1148 SSLP 22 ZFIN Curated Data While investigating arntl1a (bmal1) gene, bmal1 was found on Sanger ctg15465  ...

OTHER MAPPING INFORMATION
Chr 22 ZFIN Curated Data While investigating arntl1a (bmal1) gene, bmal1 was found on Sanger ctg15465 near SSLP markers  ...
Markers Encoded by arntl1a
fa04g03 Chr: 25 Details