ZFIN ID: ZDB-GENE-040426-2452

ZFIN ID: ZDB-GENE-040426-2452

Mapping Details

Gene Name:	splicing factor proline/glutamine-rich
Symbol:	sfpq

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	19	42,653,967 - 42,683,352	GRCz12tu
NCBI Map Viewer	19	42,653,967 - 42,683,352	GRCz12tu
Ensembl	19	40,025,928 - 40,055,391	GRCz11
NCBI Map Viewer	19	40,026,016 - 40,055,389	GRCz11
UCSC	19	-	GRCz11
Vega	19	40,438,808 - 40,468,271	GRCv10

Mapped Clones containing sfpq
DKEY-1N7	Chr: 19 Details
DKEY-246P9	Chr: 19 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
hi1779Tg	19	40,026,771 - 40,026,772	GRCz11	DIRECT		ZFIN Curated Data
kg41	19	40,026,768	GRCz11	DIRECT		Thomas-Jinu et al., 2017
sa667	19	42,655,993	GRCz12tu	DIRECT		Sealy et al., 2025
	19	40,028,050	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	40,440,930	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,988,392	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa17716	19	42,661,269	GRCz12tu	DIRECT		Sealy et al., 2025
	19	40,033,326	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	40,446,206	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,993,668	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa29250	19	42,654,693	GRCz12tu	DIRECT		Sealy et al., 2025
	19	40,026,750	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	40,439,630	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,987,092	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa36893	19	42,659,102	GRCz12tu	DIRECT		Sealy et al., 2025
	19	40,031,159	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	40,444,039	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,991,501	Zv9	DIRECT		Busch-Nentwich et al., 2013
tr241	19	40,026,717	GRCz11	DIRECT		ZFIN Curated Data
hi1779Tg	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
kg41	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
m427	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa667	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
sa17716	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa29250	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa36893	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
tr241	19		GRCz11	OTHER_MAPPING	paneledMarkersDirect
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	19		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	19		GRCz11	OTHER_MAPPING	directMappedMarker

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
19	96.7 cM	sfpq	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by sfpq
fd10f03 Chr: 19 Details
fa11h12 Chr: 19 Details

Genomic Feature tr241 is an allele of sfpq

Chr	Location	Mapped As	Panel	Mapped By	Scoring
19	56.2 cM	tr241	Boston MGH Cross (MGH)	Geisler, Robert	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Genomic Feature m427 is an allele of sfpq