ZFIN ID: ZDB-GENE-991105-4

ZFIN ID: ZDB-GENE-991105-4

Mapping Details

Gene Name:	gap junction protein alpha 1b
Symbol:	gja1b

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	20	40,715,163 - 40,720,530	GRCz11
Ensembl	20	40,715,163 - 40,720,530	GRCz11
Vega	20	40,818,053 - 40,823,420	GRCv10
NCBI Map Viewer	20	40,715,163 - 40,720,453	GRCz11
UCSC	20	-	GRCz11

Mapped Clones containing gja1b
DKEY-261A18	Chr: 20 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
cms6	20	40,717,301	GRCz11	Zhang et al., 2020
j7e1	20	40,717,813	GRCz11	Iovine et al., 2005
j7e2	20	40,717,330	GRCz11	Iovine et al., 2005
j7e3	20	40,717,276	GRCz11	Iovine et al., 2005
ou2028	20	40,717,795 - 40,717,809	GRCz11	Misu et al., 2016
sa29432	20	40,717,699	GRCz11	Busch-Nentwich et al., 2013
	20	40,820,589	GRCz10	Busch-Nentwich et al., 2013
	20	40,749,430	Zv9	Busch-Nentwich et al., 2013
sa32313	20	40,717,881	GRCz11	Busch-Nentwich et al., 2013
	20	40,820,771	GRCz10	Busch-Nentwich et al., 2013
	20	40,749,612	Zv9	Busch-Nentwich et al., 2013
sa37126	20	40,717,174	GRCz11	Busch-Nentwich et al., 2013
	20	40,820,064	GRCz10	Busch-Nentwich et al., 2013
	20	40,748,905	Zv9	Busch-Nentwich et al., 2013
tl28d	20	40,717,668	GRCz11	Misu et al., 2016

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
20	94.6 cM	cx43	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Publication / Person	Comments
gja13.1	GENE	20	Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically ...
gja13.2	GENE	20	Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically ...
gja11	GENE	20	Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically ...
gja12.1	GENE	20	Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically ...
gja12.2	GENE	20	Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically ...
gja13.1	GENE	20	Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.
z20046	SSLP	20	Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region between SSLP markers z20046 and z63495.
b123	Feature	20	Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region between SSLP markers z20046 and z63495.
gja11	GENE	20	Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.
gja13.2	GENE	20	Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.
gja12.2	GENE	20	Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.
gja12.1	GENE	20	Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.

Genomic Feature b123 is an allele of gja1b

Chr 20

Iovine et al., 2005

Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region ...

Genomic Feature b123 is an allele of gja1b