ZFIN ID: ZDB-GENE-060503-723

Mapping Details

Gene Name:	coiled-coil domain 40 molecular ruler complex subunit
Symbol:	ccdc40

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	6	24,272,324 - 24,313,661	GRCz12tu
NCBI Map Viewer	6	24,272,324 - 24,313,661	GRCz12tu
Ensembl	6	18,251,140 - 18,292,410	GRCz11
NCBI Map Viewer	6	18,251,118 - 18,292,410	GRCz11
UCSC	6	Based on NM_001271813	GRCz11
Vega	6	21,779,819 - 21,821,089	GRCv10

Mapped Clones containing ccdc40
DKEY-237I9	Chr: 6 Details
DKEY-31G6	Chr: 6 Details
DKEY-210O7	Chr: 6 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
sa8996	6	24,291,794	GRCz12tu	DIRECT	Sealy et al., 2025
	6	18,270,541	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	6	21,799,220	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	6	19,639,851	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa13373	6	24,292,327	GRCz12tu	DIRECT	Sealy et al., 2025
	6	18,271,074	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	6	21,799,753	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	6	19,639,318	Zv9	DIRECT	Busch-Nentwich et al., 2013
to237b	6	18,274,310	GRCz11	DIRECT	Becker-Heck et al., 2011
la029191Tg	6	19,658,235 - 19,658,245	Zv9	ZFIN_Zv9
	6		GRCz11	OTHER_MAPPING	ZFIN Curated Data
m505	6		GRCz11	OTHER_MAPPING	ZFIN Curated Data
tj8	6		GRCz11	OTHER_MAPPING	ZFIN Curated Data
tl215	6		GRCz11	OTHER_MAPPING	ZFIN Curated Data
tm138a	6		GRCz11	OTHER_MAPPING	ZFIN Curated Data
to237b	6		GRCz11	OTHER_MAPPING	ZFIN Curated Data
ts277	6		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS: No data available

Markers Encoded by ccdc40
fb11d02 Chr: 6 Details

Genomic Feature tl215 is an allele of ccdc40