ZFIN ID: ZDB-GENE-020829-1

Mapping Details

Gene Name: SIM bHLH transcription factor 1a
Symbol: sim1a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 16 1,564,192 - 1,601,387 GRCz12tu
NCBI Map Viewer 16 1,564,192 - 1,601,387 GRCz12tu
Ensembl 16 1,470,418 - 1,503,023 GRCz11
NCBI Map Viewer 16 1,470,418 - 1,503,023 GRCz11
UCSC 16 - GRCz11
Vega 16 1,446,530 - 1,479,135 GRCv10
Mapped Clones containing sim1a
DKEY-265C18 Chr: 16 Details
CH211-167H2 Chr: 16 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa2864 16 1,594,939 GRCz12tu DIRECT Sealy et al., 2025
16 1,496,603 GRCz11 DIRECT Busch-Nentwich et al., 2013
16 1,472,715 GRCz10 DIRECT Busch-Nentwich et al., 2013
16 1,523,598 Zv9 DIRECT Busch-Nentwich et al., 2013
sa30996 16 1,574,777 GRCz12tu DIRECT Sealy et al., 2025
16 1,476,461 GRCz11 DIRECT Busch-Nentwich et al., 2013
16 1,452,573 GRCz10 DIRECT Busch-Nentwich et al., 2013
16 1,503,456 Zv9 DIRECT Busch-Nentwich et al., 2013
sa36012 16 1,568,834 GRCz12tu DIRECT Sealy et al., 2025
16 1,470,518 GRCz11 DIRECT Busch-Nentwich et al., 2013
16 1,446,630 GRCz10 DIRECT Busch-Nentwich et al., 2013
16 1,497,513 Zv9 DIRECT Busch-Nentwich et al., 2013
sa42640 16 1,574,777 GRCz12tu DIRECT Sealy et al., 2025
16 1,476,461 GRCz11 DIRECT Busch-Nentwich et al., 2013
16 1,452,573 GRCz10 DIRECT Busch-Nentwich et al., 2013
16 1,503,456 Zv9 DIRECT Busch-Nentwich et al., 2013
sa42641 16 1,600,642 GRCz12tu DIRECT Sealy et al., 2025
16 1,502,298 GRCz11 DIRECT Busch-Nentwich et al., 2013
16 1,478,410 GRCz10 DIRECT Busch-Nentwich et al., 2013
16 1,529,293 Zv9 DIRECT Busch-Nentwich et al., 2013
sa2864 16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
16 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa30996 16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
16 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa36012 16 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa42640 16 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa42641 16 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
zf3867Tg 16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
16 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
16 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
16 7.2 cM sim1 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION: No data available
Genomic Feature zf3867Tg is an allele of sim1a