ZFIN ID: ZDB-GENE-000828-1

Mapping Details

Gene Name: sodium channel, voltage gated, type VIII, alpha subunit a
Symbol: scn8aa
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 23 30,170,119 - 30,265,572 GRCz12tu
NCBI Map Viewer 23 30,170,119 - 30,265,572 GRCz12tu
Ensembl 23 27,251,626 - 27,345,425 GRCz11
NCBI Map Viewer 23 27,248,688 - 27,345,425 GRCz11
UCSC 23 - GRCz11
Vega 23 27,325,085 - 27,418,884 GRCv10
Mapped Clones containing scn8aa
DKEY-9P24 Chr: 23 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
s3032 23 27,336,104 GRCz11 DIRECT Griffin et al., 2021
sa12919 23 30,173,337 GRCz12tu DIRECT Sealy et al., 2025
23 27,253,190 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 27,326,649 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 27,493,827 Zv9 DIRECT Busch-Nentwich et al., 2013
sa31090 23 30,265,342 GRCz12tu DIRECT Sealy et al., 2025
23 27,345,195 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 27,418,654 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 27,585,832 Zv9 DIRECT Busch-Nentwich et al., 2013
sa37728 23 30,210,341 GRCz12tu DIRECT Sealy et al., 2025
23 27,290,194 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 27,363,653 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 27,530,831 Zv9 DIRECT Busch-Nentwich et al., 2013
sa43994 23 30,195,458 GRCz12tu DIRECT Sealy et al., 2025
23 27,275,311 GRCz11 DIRECT Busch-Nentwich et al., 2013
23 27,348,770 GRCz10 DIRECT Busch-Nentwich et al., 2013
23 27,515,948 Zv9 DIRECT Busch-Nentwich et al., 2013
la022612Tg 23 27,539,879 - 27,539,889 Zv9 ZFIN_Zv9 BurgessLin
la028527Tg 23 27,567,935 - 27,567,945 Zv9 ZFIN_Zv9 BurgessLin
la022612Tg 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
la028527Tg 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
mi89 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
mi130 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
s3032 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa12919 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa31090 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa37728 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa43994 23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
tW1752X 23 GRCz11 OTHER_MAPPING linkagesDirectMem2
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
23 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
23 GRCz11 OTHER_MAPPING linkagesDirectMem1

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z42693 SSLP 23 Wright et al., 2010
z14967 SSLP 23 Wright et al., 2010
tW1752X Feature 23 0.0 KB Wright et al., 2010

OTHER MAPPING INFORMATION
Genomic Feature tW1752X is an allele of scn8aa
Marker Type Chr Distance Publication / Person Comments
scn8aa GENE 23 0.0 KB Wright et al., 2010
z42693 SSLP 23 Wright et al., 2010
z14967 SSLP 23 Wright et al., 2010
Genomic Feature s3032 is an allele of scn8aa
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