ZFIN ID: ZDB-GENE-980526-333

Mapping Details

Gene Name: SRY-box transcription factor 3
Symbol: sox3
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 14 37,286,151 - 37,287,914 GRCz12tu
NCBI Map Viewer 14 37,286,151 - 37,287,914 GRCz12tu
Ensembl 14 32,742,701 - 32,744,464 GRCz11
NCBI Map Viewer 14 32,742,701 - 32,744,464 GRCz11
UCSC 14 - GRCz11
Vega 14 32,402,387 - 32,404,150 GRCv10
Mapped Clones containing sox3
CH211-143L19 Chr: 14 Details
CH211-285J6 Chr: 14 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
whu101 14 32,743,850 - 32,743,856 GRCz11 DIRECT Hong et al., 2018
whu102 14 32,743,827 - 32,743,866 GRCz11 DIRECT Hong et al., 2018
x52 14 32,744,184 - 32,744,187 GRCz11 DIRECT Gou et al., 2018
x53 14 32,744,182 - 32,744,185 GRCz11 DIRECT Gou et al., 2018
fh276 14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
fh277 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
ihb425 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
kut1Tg 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
kut2Tg 14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
kut3Tg 14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
kut4Tg 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sox3_unrecovered 14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
whu101 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
whu102 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
x52 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
x53 9 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
14 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
14 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
14 127.3 cM sox3 Mother of Pearl (MOP) Postlethwait, John H. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Markers Encoded by sox3
fd02a08 Chr: 9 Details
Genomic Feature kut2Tg is an allele of sox3
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