ZFIN ID: ZDB-GENE-990415-200

Mapping Details

Gene Name:	paired box 6a
Symbol:	pax6a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	25	15,971,253 - 16,053,519	GRCz12tu
NCBI Map Viewer	25	15,971,253 - 16,053,519	GRCz12tu
Ensembl	25	15,029,041 - 15,049,781	GRCz11
NCBI Map Viewer	25	15,029,041 - 15,049,748	GRCz11
UCSC	25	-	GRCz11
Vega	25	14,932,641 - 14,953,381	GRCv10

Mapped Clones containing pax6a
DKEY-82I7	Chr: 25 Details
DKEYP-46C10	Chr: 25 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
ka709	25	15,031,604 - 15,034,614	GRCz11	DIRECT	Takamiya et al., 2020
la023151Tg	25	15,402,408 - 15,402,418	Zv9	ZFIN_Zv9
ka709	25		GRCz11	OTHER_MAPPING	ZFIN Curated Data
kut5Tg	25		GRCz11	OTHER_MAPPING	ZFIN Curated Data
kut6Tg	25		GRCz11	OTHER_MAPPING	ZFIN Curated Data
kut7Tg	25		GRCz11	OTHER_MAPPING	ZFIN Curated Data
la023151Tg	25		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
25	1628.0 cR	pax6a	Goodfellow T51 (T51)	Geisler, Robert	Data
25	37.63 cM	pax6a	Gates et al (GAT)	Talbot, William S.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
smb825Et	Feature	25		Kikuta et al., 2007	Et(CLG-YFP)smb825 was mapped to 116 kb downstream of pax6a on LG25.

Chr 25

Kikuta et al., 2007

Et(CLG-YFP)smb825 was mapped to 116 kb downstream of pax6a on LG25.

Markers Encoded by pax6a
fc20e07 Chr: 25 Details

Genomic Feature ka709 is an allele of pax6a