ZFIN ID: ZDB-GENE-011213-1

ZFIN ID: ZDB-GENE-011213-1

Mapping Details

Gene Name:	hairy-related 9
Symbol:	her9

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	23	26,338,850 - 26,340,605	GRCz12tu
NCBI Map Viewer	23	26,338,850 - 26,340,605	GRCz12tu
Ensembl	23	23,399,520 - 23,401,305	GRCz11
NCBI Map Viewer	23	23,399,519 - 23,401,274	GRCz11
UCSC	23	-	GRCz11
Vega	23	23,472,969 - 23,474,754	GRCv10

Mapped Clones containing her9
DKEY-27M6	Chr: 23 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
co66	23	23,400,262	GRCz11	DIRECT		Stenzel et al., 2022
sa43978	23	26,339,194	GRCz12tu	DIRECT		Sealy et al., 2025
	23	23,399,863	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	23	23,473,312	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	23	23,694,005	Zv9	DIRECT		Busch-Nentwich et al., 2013
uky2	23	23,400,974 - 23,400,975	GRCz11	DIRECT		Coomer et al., 2020
uky3	23	23,400,974	GRCz11	DIRECT		Coomer et al., 2020
la011036Tg	23	23,694,756 - 23,694,766	Zv9	ZFIN_Zv9	BurgessLin
co66	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
la011036Tg	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa43978	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
uky2	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
uky3	23		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	23		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
23	81.9 cM	her9	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
fc30a03	EST	23		Leve et al., 2001	Leve, et al. (2001. Dev Genes Evol 211:493-500.) report that the EST fc30a03 corresponds to the her9 gene. fc30a03 has been mapped to LG23.

Chr 23

Leve et al., 2001

Leve, et al. (2001. Dev Genes Evol 211:493-500.) report that the EST fc30a03 corresponds to the ...

Markers Encoded by her9
fc30a03 Chr: 23 Details

Genomic Feature uky3 is an allele of her9