ZFIN ID: ZDB-GENE-040718-399

Mapping Details

Gene Name:	calcium channel, voltage-dependent, beta 1 subunit
Symbol:	cacnb1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	3	14,826,345 - 14,900,433	GRCz12tu
NCBI Map Viewer	3	14,826,345 - 14,900,433	GRCz12tu
Ensembl	3	16,157,120 - 16,227,683	GRCz11
NCBI Map Viewer	3	16,153,678 - 16,227,671	GRCz11
UCSC	3	-	GRCz11
Vega	3	16,007,320 - 16,077,883	GRCv10

Mapped Clones containing cacnb1
CH211-10J9	Chr: 3 Details
DKEY-81L17	Chr: 3 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa8705	3	14,853,512	GRCz12tu	DIRECT		Sealy et al., 2025
	3	16,180,751	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	16,030,951	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	15,800,732	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa33120	3	14,864,515	GRCz12tu	DIRECT		Sealy et al., 2025
	3	16,191,754	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	16,041,954	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	15,811,735	Zv9	DIRECT		Busch-Nentwich et al., 2013
la015086Tg	3	15,804,309 - 15,804,319	Zv9	ZFIN_Zv9	BurgessLin
ir1092	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
la015086Tg	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
mi90	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	3		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	3		GRCz11	OTHER_MAPPING	linkagesDirectMem2
sa8705	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa33120	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
ts25	3		GRCz11	OTHER_MAPPING	directMappedMarker
	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	3		GRCz11	OTHER_MAPPING	paneledMarkersDirect

GENETIC MAPPING PANELS: No data available

Genomic Feature ts25 is an allele of cacnb1

Chr	Location	Mapped As	Panel	Mapped By	Scoring
3	77.0 cM	ts25	Boston MGH Cross (MGH)	Geisler, Robert	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Genomic Feature mi90 is an allele of cacnb1

Marker	Type	Chr	Distance	Publication / Person	Comments
z9257	SSLP	3	150.25 cR	Zhou et al., 2006	Zhou, W. et.al. (2006, Cell Calcium 39(3):227-236) mapped red^mi90 to LG3 by bulk segregant analysis and used radiation hybrid panel LN45 for detailed mapping.

Genomic Feature ir1092 is an allele of cacnb1