ZFIN ID: ZDB-GENE-040718-399
Gene Name: calcium channel, voltage-dependent, beta 1 subunit
Gene Symbol: cacnb1
Sequence Ontology ID : SO:0000704

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Previous Names: dihydropyridine receptor b1 (1), red, relaxed, zgc:91982

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
GENE EXPRESSION
All Expression Data: 8 figures from 3 publications
Directly Submitted Expression Data: 6 figures (22 images) from Thisse et al., 2004 [MGC:91982]
Wild-type Stages, Structures: Segmentation:1-4 somites (10.33h-11.66h) to Larval:Protruding-mouth (72.0h-96.0h, 3.5mm)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la015086Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • mi90 Point Mutation Unknown Unknown
    sa8705 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa33120 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • ts25 Point Mutation Exon 13 Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • PHENOTYPE
    Data: 6 figures from 4 publications
    Observed in:
    DISEASE ASSOCIATED WITH cacnb1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH cacnb1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process muscle contraction (more)
    Cellular Component voltage-gated calcium channel complex (more)
    Molecular Function protein binding (more)
    GO Terms (all 11)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000584 (1)
  • InterPro:IPR001452 (1)
  • InterPro:IPR005443 (1)
  • InterPro:IPR008145 (1)
  • InterPro:IPR027417 (1)
  • InterPro:IPR036028 (1)
  • PROSITE:PS50002 (1)
  • Pfam:PF00625 (1)
  • Pfam:PF12052 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA cacnb1-001 (1) 1670
    cacnb1-002 (1) 1554
    cacnb1-003 (1) 2043
    ncRNA cacnb1-004 (1) 690
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM cacnb1 No data available
    MARKER RELATIONSHIPS
    cacnb1Contained in: [BAC] CH211-10J9 (1) (order this), DKEY-81L17 (1) (order this)
    cacnb1Encodes: [cDNA] MGC:91982 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001002652 (1) 1680bp
    Genomic GenBank:CR388097 (1) 195927bp
    Select Tool
    Polypeptide UniProtKB:Q2Q551 (1) 603aa
    Sequence Clusters UniGene:86907 (1)
    Sequence Information (all 31)
    OTHER cacnb1 GENE PAGES
  • Alliance (1)
  • Gene:436925 (1)
  • VEGA:OTTDARG00000019682 (1)
  • Ensembl(GRCz11):ENSDARG00000002167 (2)
  • ORTHOLOGY for cacnb1 (Chr: 3)
    CITATIONS (43)