ZFIN ID: ZDB-GENE-080102-2

ZFIN ID: ZDB-GENE-080102-2

Mapping Details

Gene Name:	choline O-acetyltransferase a
Symbol:	chata

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	13	32,796,695 - 32,810,069	GRCz12tu
NCBI Map Viewer	13	32,796,695 - 32,810,069	GRCz12tu
Ensembl	13	29,409,359 - 29,421,331	GRCz11
NCBI Map Viewer	13	29,407,973 - 29,421,355	GRCz11
UCSC	13	-	GRCz11
Vega	13	29,278,909 - 29,290,881	GRCv10

Mapped Clones containing chata
CH211-222I16	Chr: 13 Details
CH211-232K3	Chr: 13 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa22323	13	32,808,055	GRCz12tu	DIRECT		Sealy et al., 2025
	13	29,419,342	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	29,288,892	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	29,642,944	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa31935	13	32,805,767	GRCz12tu	DIRECT		Sealy et al., 2025
	13	29,417,054	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	29,286,604	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	29,640,656	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa45487	13	32,809,486	GRCz12tu	DIRECT		Sealy et al., 2025
	13	29,644,375	Zv9	DIRECT		Busch-Nentwich et al., 2013
tk64	13	29,419,308	GRCz11	DIRECT		Joshi et al., 2018
tf247	13		GRCz11	GENERAL_LOAD	load data [singleton]
sa22323	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa31935	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa45487	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
tf247	22		GRCz11	OTHER_MAPPING	directMappedMarker
	13		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	13		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	22		GRCz11	OTHER_MAPPING	paneledMarkersDirect
tk64	13		GRCz11	OTHER_MAPPING	directMappedMarker
	13		GRCz11	OTHER_MAPPING	paneledMarkersDirect
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

Genomic Feature tf247 is an allele of chata

Chr	Location	Mapped As	Panel	Mapped By	Scoring
22	11.4 cM	tf247	Boston MGH Cross (MGH)	Geisler, Robert	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Genomic Feature tk64 is an allele of chata

Chr	Location	Mapped As	Panel	Mapped By	Scoring
13	46.2 cM	tk64	Boston MGH Cross (MGH)	Geisler, Robert	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Genomic Feature tf247 is an allele of chata

Marker	Type	Chr	Distance	Publication / Person	Comments
z17223	SSLP	13		Wang et al., 2008	Wang et al. (2008. J. Neurophysiol. 100: 1995-2004) report mapping the bajan ...

Genomic Feature tf247 is an allele of chata

Chr 13

Wang et al. (2008. J. Neurophysiol. 100: 1995-2004) report mapping the bajan (tf247) mutant to LG13 ...

Genomic Feature sa45487 is an allele of chata