ZFIN ID: ZDB-GENE-990415-208

Mapping Details

Gene Name: platelet-derived growth factor receptor, alpha polypeptide
Symbol: pdgfra
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 20 24,985,051 - 25,080,680 GRCz12tu
NCBI Map Viewer 20 24,985,051 - 25,080,680 GRCz12tu
Ensembl 20 22,435,180 - 22,476,255 GRCz11
NCBI Map Viewer 20 22,435,179 - 22,476,263 GRCz11
UCSC 20 - GRCz11
Vega 20 22,535,507 - 22,576,582 GRCv10
Mapped Clones containing pdgfra
DKEY-97C6 Chr: 20 Details
CH211-176L11 Chr: 20 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
b1059 20 22,443,829 GRCz11 DIRECT Eberhart et al., 2008
sa271 20 25,013,125 GRCz12tu DIRECT Sealy et al., 2025
20 22,463,201 GRCz11 DIRECT Busch-Nentwich et al., 2013
20 22,563,528 GRCz10 DIRECT Busch-Nentwich et al., 2013
20 22,449,497 Zv9 DIRECT Busch-Nentwich et al., 2013
sa29348 20 25,014,193 GRCz12tu DIRECT Sealy et al., 2025
20 22,464,269 GRCz11 DIRECT Busch-Nentwich et al., 2013
20 22,564,596 GRCz10 DIRECT Busch-Nentwich et al., 2013
20 22,450,565 Zv9 DIRECT Busch-Nentwich et al., 2013
sa43427 20 25,020,770 GRCz12tu DIRECT Sealy et al., 2025
20 22,470,839 GRCz11 DIRECT Busch-Nentwich et al., 2013
20 22,571,166 GRCz10 DIRECT Busch-Nentwich et al., 2013
20 22,457,135 Zv9 DIRECT Busch-Nentwich et al., 2013
sa43428 20 25,020,832 GRCz12tu DIRECT Sealy et al., 2025
20 22,470,901 GRCz11 DIRECT Busch-Nentwich et al., 2013
20 22,571,228 GRCz10 DIRECT Busch-Nentwich et al., 2013
20 22,457,197 Zv9 DIRECT Busch-Nentwich et al., 2013
sk16 20 22,459,959 GRCz11 DIRECT Bloomekatz et al., 2017
la021462Tg 20 22,460,241 - 22,460,251 Zv9 ZFIN_Zv9 BurgessLin
b1059 20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING linkagesDirectMem1
20 GRCz11 OTHER_MAPPING linkagesDirectMem2
4 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la021462Tg 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
4 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa271 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
4 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa29348 20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
4 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa43427 20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
4 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa43428 20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
4 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sk16 20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
4 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
smh1300Gt 20 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
20 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
4 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
20 119.3 cM pdgra Mother of Pearl (MOP) Postlethwait, John H. Data
20 1644.0 cR pdgfra Goodfellow T51 (T51) Geisler, Robert Data
20 75.3 cM pdgfra Heat Shock (HS) Woods, Ian G. Data
20 35.8 cM pdgfra Gates et al (GAT) Talbot, William S. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Markers Encoded by pdgfra
fv91b12 Chr: 4 Details
Genomic Feature b1059 is an allele of pdgfra
Marker Type Chr Distance Publication / Person Comments
z14542 SSLP 20 1.6 cM Eberhart et al., 2008 Eberhart et. al. (2008, Nat. Genet. 40(3): 290-298) mapped b10590to Chr. 20  ...
z20582 SSLP 20 0.46 cM Eberhart et al., 2008 Eberhart et. al. (2008, Nat. Genet. 40(3): 290-298) mapped b10590to Chr. 20  ...
Genomic Feature smh1300Gt is an allele of pdgfra
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