ZFIN ID: ZDB-GENE-101028-4

Mapping Details

Gene Name: protein tyrosine phosphatase receptor type T
Symbol: ptprt
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 6 53,656,633 - 54,175,921 GRCz12tu
NCBI Map Viewer 6 53,656,633 - 54,175,921 GRCz12tu
Ensembl 6 51,180,106 - 51,386,656 GRCz11
Ensembl 6 51,009,981 - 51,101,834 GRCz11
NCBI Map Viewer 6 51,006,134 - 51,476,863 GRCz11
Vega 6 51,010,762 - 51,102,615 GRCv10
Vega 6 51,180,107 - 51,386,657 GRCv10
Mapped Clones containing ptprt
DKEYP-79D4 Chr: 6 Details
CH73-45K13 Chr: 6 Details
CH211-202O4 Chr: 6 Details
DKEY-279D7 Chr: 6 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa7050 6 53,844,104 GRCz12tu DIRECT Sealy et al., 2025
6 51,195,727 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 51,195,728 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 51,146,546 Zv9 DIRECT Busch-Nentwich et al., 2013
sa11104 6 53,926,052 GRCz12tu DIRECT Sealy et al., 2025
6 51,277,318 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 51,277,319 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 51,228,137 Zv9 DIRECT Busch-Nentwich et al., 2013
sa15512 6 53,779,764 GRCz12tu DIRECT Sealy et al., 2025
6 51,131,491 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 51,133,473 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 51,084,132 Zv9 DIRECT Busch-Nentwich et al., 2013
sa15571 6 53,671,811 GRCz12tu DIRECT Sealy et al., 2025
6 51,024,227 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 51,025,008 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 50,975,530 Zv9 DIRECT Busch-Nentwich et al., 2013
sa17989 6 53,712,446 GRCz12tu DIRECT Sealy et al., 2025
6 51,064,872 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 51,065,653 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 51,016,175 Zv9 DIRECT Busch-Nentwich et al., 2013
sa31544 6 53,715,377 GRCz12tu DIRECT Sealy et al., 2025
6 51,067,803 GRCz11 DIRECT Busch-Nentwich et al., 2013
6 51,068,584 GRCz10 DIRECT Busch-Nentwich et al., 2013
6 51,019,106 Zv9 DIRECT Busch-Nentwich et al., 2013
la025645Tg 6 50,983,072 - 50,983,082 Zv9 ZFIN_Zv9 BurgessLin
la025646Tg 6 51,015,906 - 51,015,916 Zv9 ZFIN_Zv9 BurgessLin
la025647Tg 6 51,141,626 - 51,141,636 Zv9 ZFIN_Zv9 BurgessLin
la025648Tg 6 51,414,739 - 51,414,749 Zv9 ZFIN_Zv9 BurgessLin
la025645Tg 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
la025646Tg 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
la025647Tg 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
la025648Tg 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa7050 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa11104 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa15512 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa15571 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa17989 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa31544 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available
Genomic Feature sa31544 is an allele of ptprt
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