Gene

ptprt

ID

ZDB-GENE-101028-4

Name

protein tyrosine phosphatase receptor type T

Symbol

ptprt Nomenclature History

Previous Names

None

Type

protein_coding_gene

Location

Chr: 6 Mapping Details/Browsers

Description

Predicted to have protein tyrosine phosphatase activity. Predicted to be involved in protein dephosphorylation. Predicted to localize to integral component of membrane. Orthologous to human PTPRT (protein tyrosine phosphatase receptor type T).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: 1 Figure from Ma et al., 2022
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ptprt Human Ortholog

No data available

Associated With ptprt Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Active_site	IPR016130	Protein-tyrosine phosphatase, active site
Domain	IPR000242	Tyrosine-specific protein phosphatase, PTPase domain
Domain	IPR000387	Tyrosine-specific protein phosphatases domain
Domain	IPR000998	MAM domain
Domain	IPR003595	Protein-tyrosine phosphatase, catalytic
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR003961	Fibronectin type III
Domain	IPR007110	Immunoglobulin-like domain
Family	IPR051622	Receptor-type Tyrosine-protein Phosphatases
Homologous_superfamily	IPR013320	Concanavalin A-like lectin/glucanase domain superfamily
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR029021	Protein-tyrosine phosphatase-like
Homologous_superfamily	IPR036116	Fibronectin type III superfamily
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	Concanavalin A-like lectin/glucanase domain superfamily	Fibronectin type III	Fibronectin type III superfamily	Immunoglobulin domain subtype	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	MAM domain	Protein-tyrosine phosphatase, active site	Protein-tyrosine phosphatase, catalytic	Protein-tyrosine phosphatase-like	Receptor-type Tyrosine-protein Phosphatases	Tyrosine-specific protein phosphatase, PTPase domain	Tyrosine-specific protein phosphatases domain
UniProtKB:A0A8M6Z1C7 InterPro	1478
UniProtKB:A0A8M6Z701 InterPro	1496
UniProtKB:A0A8M6Z7J7 InterPro	1468
UniProtKB:A0A8M6YZU0 InterPro	1487
UniProtKB:A0A8M9QGF1 InterPro	1489
UniProtKB:A0A8M9QGE8 InterPro	1506
UniProtKB:A0A8M9Q790 InterPro	1507
UniProtKB:A0A8M6YYZ9 InterPro	1497
UniProtKB:A0A8M9Q0Y9 InterPro	1498
UniProtKB:A0A8M6YZ05 InterPro	1465
UniProtKB:A0A8M9PNA4 InterPro	1505
UniProtKB:A0A8M9Q0Y4 InterPro	1508
UniProtKB:A0A8M9QBE1 InterPro	1505
UniProtKB:A0A8M9Q794 InterPro	1492
UniProtKB:A0A8N7T7Y9 InterPro	1475

Transcripts

Genome Browsers

NCBI

Ensembl

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ptprt-201 (1) Ensembl	Ensembl	2,113 nt	Select Tool ZFIN BLAST
mRNA	ptprt-202 (1) Ensembl	Ensembl	4,329 nt	Select Tool ZFIN BLAST
mRNA	ptprt-203 (1) Ensembl	Ensembl	4,326 nt	Select Tool ZFIN BLAST
mRNA	ptprt-204 (1) Ensembl	Ensembl	4,308 nt	Select Tool ZFIN BLAST
mRNA	ptprt-205 (1) Ensembl	Ensembl	2,101 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance

Citations