ZFIN ID: ZDB-GENE-040812-1

Mapping Details

Gene Name:	transient receptor potential cation channel, subfamily C, member 5a
Symbol:	trpc5a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	1	11,893,986 - 12,031,411	GRCz12tu
NCBI Map Viewer	1	11,893,986 - 12,031,411	GRCz12tu
Ensembl	1	10,486,882 - 10,620,345	GRCz11
NCBI Map Viewer	1	10,485,905 - 10,620,345	GRCz11
UCSC	1	Based on NM_001327747	GRCz11
UCSC	1	Based on NM_001441823	GRCz11
UCSC	1	Based on NM_001044827	GRCz11
UCSC	1	Based on NM_001441826	GRCz11
UCSC	1	Based on NM_001441824	GRCz11
UCSC	1	Based on NM_001441825	GRCz11
UCSC	1	Based on NM_001441827	GRCz11
Vega	1	9,802,771 - 9,936,348	GRCv10

Mapped Clones containing trpc5a
DKEY-31E10	Chr: 1 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
sa3325	1	11,984,350	GRCz12tu	DIRECT	Sealy et al., 2025
	1	10,577,946	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	9,893,835	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	9,754,049	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa5799	1	11,984,350	GRCz12tu	DIRECT	Sealy et al., 2025
	1	10,577,946	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	9,893,835	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	9,754,049	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa19436	1	11,970,423	GRCz12tu	DIRECT	Sealy et al., 2025
	1	10,563,215	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	9,879,104	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	9,739,318	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa32603	1	11,895,947	GRCz12tu	DIRECT	Sealy et al., 2025
	1	10,487,677	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	9,803,566	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	9,663,780	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa32604	1	11,924,962	GRCz12tu	DIRECT	Sealy et al., 2025
	1	10,517,530	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	1	9,833,419	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	1	9,693,633	Zv9	DIRECT	Busch-Nentwich et al., 2013
zko224a	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data
zko224b	1		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS: No data available

Markers Encoded by trpc5a
IMAGE:2643303 Chr: 14 Details

Genomic Feature sa3325 is an allele of trpc5a