ZFIN ID: ZDB-GENE-060503-351

Mapping Details

Gene Name:	collagen, type XVI, alpha 1
Symbol:	col16a1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	19	38,473,758 - 38,611,814	GRCz11
Ensembl	19	38,473,758 - 38,611,814	GRCz11
Vega	19	38,886,638 - 39,024,694	GRCv10

Mapped Clones containing col16a1
DKEY-27A13	Chr: 19 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa8492	19	41,132,382	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,535,799	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	38,948,679	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,084,696	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa10058	19	41,122,586	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,526,003	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	38,938,883	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,074,900	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa10956	19	41,084,941	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,488,472	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	38,901,352	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,037,369	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa12058	19	41,092,550	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,496,081	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	38,908,961	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,044,978	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa15494	19	41,123,023	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,526,440	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	38,939,320	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,075,337	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa16684	19	41,190,892	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,594,097	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	39,006,977	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,142,994	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa23577	19	41,070,415	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,473,946	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	38,886,826	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,022,843	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa29247	19	41,092,412	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,495,943	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	38,908,823	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,044,840	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa36890	19	41,085,132	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,488,663	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	38,901,543	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,037,560	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa43329	19	41,072,150	GRCz12tu	DIRECT		Sealy et al., 2025
	19	38,475,681	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	19	38,888,561	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	19	40,024,578	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa8492	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa10058	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa10956	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa12058	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa15494	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa16684	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa23577	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa29247	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa36890	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa43329	19		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa29247 is an allele of col16a1