ZFIN ID: ZDB-GENE-030131-5964

Mapping Details

Gene Name: SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2
Symbol: smarca2
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 5 46,021,383 - 46,132,627 GRCz12tu
NCBI Map Viewer 5 46,021,383 - 46,132,627 GRCz12tu
Ensembl 5 45,138,934 - 45,284,136 GRCz11
NCBI Map Viewer 5 45,138,931 - 45,284,143 GRCz11
UCSC 5 - GRCz11
Vega 5 44,538,781 - 44,683,983 GRCv10
Mapped Clones containing smarca2
CH211-130P8 Chr: 5 Details
DKEYP-31E5 Chr: 5 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
pu101 5 45,141,059 - 45,219,362 GRCz11 DIRECT Kim et al., 2020
pu102 5 45,219,361 - 45,269,020 GRCz11 DIRECT Kim et al., 2020
pu103 5 45,219,365 - 45,269,017 GRCz11 DIRECT Kim et al., 2020
sa2224 5 46,047,315 GRCz12tu DIRECT Sealy et al., 2025
5 45,199,564 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 44,599,411 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 46,818,146 Zv9 DIRECT Busch-Nentwich et al., 2013
sa20515 5 46,077,713 GRCz12tu DIRECT Sealy et al., 2025
5 45,230,566 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 44,630,413 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 46,849,148 Zv9 DIRECT Busch-Nentwich et al., 2013
sa26560 5 46,031,188 GRCz12tu DIRECT Sealy et al., 2025
5 45,183,306 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 44,583,153 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 46,801,888 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33690 5 46,040,533 GRCz12tu DIRECT Sealy et al., 2025
5 45,192,649 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 44,592,496 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 46,811,231 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33691 5 46,077,524 GRCz12tu DIRECT Sealy et al., 2025
5 45,230,377 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 44,630,224 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 46,848,959 Zv9 DIRECT Busch-Nentwich et al., 2013
la015707Tg 5 46,757,783 - 46,757,793 Zv9 ZFIN_Zv9 BurgessLin
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
pu101 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
pu102 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
pu103 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
pu104 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa2224 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa20515 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa26560 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa33690 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa33691 6 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION
Markers Encoded by smarca2
fi27f11 Chr: 6 Details
fa56c07 Chr: 5 Details
MGC:66238 Chr: 5 Details
Genomic Feature sa20515 is an allele of smarca2
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