| ZFIN ID: ZDB-GENE-001103-2 |
| Gene Name: | SRY-box transcription factor 9b |
|---|---|
| Symbol: | sox9b |
PHYSICAL MAP AND BROWSER
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| Mapped Clones containing sox9b | |
|---|---|
| CH1073-175H21 | Chr: 3 Details |
PHYSICAL MAPPING
| Feature | Chr | Position | Assembly | Source | DetailedSource | Citations |
|---|---|---|---|---|---|---|
| sa40193 | 3 | 67,518,912 | GRCz12tu | DIRECT | Sealy et al., 2025 | |
| 3 | 62,525,175 | GRCz11 | DIRECT | Busch-Nentwich et al., 2013 | ||
| 3 | 62,345,930 | GRCz10 | DIRECT | Busch-Nentwich et al., 2013 | ||
| 3 | 63,181,960 | Zv9 | DIRECT | Busch-Nentwich et al., 2013 | ||
| fh313 | 3 | GRCz11 | OTHER_MAPPING | Feature location obtained from related gene that has mapped_marker info | ||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGenePaneledMarkers | |||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneLinkage | |||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneGBrowse | |||
| sa40193 | 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGenePaneledMarkers | ||
| 3 | GRCz11 | OTHER_MAPPING | Feature location obtained from related gene that has mapped_marker info | |||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneGBrowse | |||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneLinkage | |||
| sox9b_unrecovered | 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneLinkage | ||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGenePaneledMarkers | |||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneGBrowse | |||
| 3 | GRCz11 | OTHER_MAPPING | Feature location obtained from related gene that has mapped_marker info | |||
| sox9b_unspecified | 3 | GRCz11 | OTHER_MAPPING | Feature location obtained from related gene that has mapped_marker info | ||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneLinkage | |||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGeneGBrowse | |||
| 3 | GRCz11 | OTHER_MAPPING | featureLocationPullThruFromGenePaneledMarkers |
| Chr | Location | Mapped As | Panel | Mapped By | Scoring |
|---|---|---|---|---|---|
| 3 | 189.8 cM | sox9b | Mother of Pearl (MOP) | Postlethwait, John H. | Data |
| 3 | 122.5 cM | sox9b | Heat Shock (HS) | Woods, Ian G. | Data |
| Note: Physical map location as
displayed in the genome browsers is more precise than linkage map location. Physical map location should be used whenever possible. |
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| Marker | Type | Chr | Distance | Publication / Person | Comments |
|---|---|---|---|---|---|
| tbl3 | GENE | 3 | Hutchinson et al., 2012 | Hutchinson, et al. (2012. Dev. Biol. 368(2):261-272.) reports mapping the ... | |
| z25883 | SSLP | 3 | Hutchinson et al., 2012 | Hutchinson, et al. (2012. Dev. Biol. 368(2):261-272.) reports mapping the ... | |
| z54395 | SSLP | 3 | Hutchinson et al., 2012 | Hutchinson, et al. (2012. Dev. Biol. 368(2):261-272.) reports mapping the ... | |
| Df(Chr03:noxo1a,zgc:113100,sox8b,proza,tbl3)cz26 | Feature | 3 | Hutchinson et al., 2012 | Hutchinson, et al. (2012. Dev. Biol. 368(2):261-272.) reports mapping the ... | |
| z1191 | SSLP | 3 | Yan et al., 2005 | Yan et al.(2005, Development 132(5):1069-1083) mapped the deficiency to LG3 with ab03a10 present and z9463, fa17a06, fc74g06, sox9b, and AW291208 absent. | |
| z3100 | SSLP | 3 | Yan et al., 2005 | Yan et al.(2005, Development 132(5):1069-1083) mapped the deficiency to LG3 with ab03a10 present and z9463, fa17a06, fc74g06, sox9b, and AW291208 absent. |
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| Markers Encoded by sox9b | ||
|---|---|---|
| fb18d01 Chr: 3 Details | ||
| Genomic Feature sa40193 is an allele of sox9b |