ZFIN ID: ZDB-GENE-990415-127

Mapping Details

Gene Name:	SIX homeobox 3a
Symbol:	six3a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	13	10,688,997 - 10,777,863	GRCz12tu
NCBI Map Viewer	13	10,688,997 - 10,777,863	GRCz12tu
Ensembl	13	10,258,007 - 10,261,383	GRCz11
NCBI Map Viewer	13	10,258,007 - 10,261,383	GRCz11
UCSC	13	-	GRCz11
Vega	13	10,125,532 - 10,128,908	GRCv10

Mapped Clones containing six3a
DKEY-103L3	Chr: 13 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa42147	13	10,691,564	GRCz12tu	DIRECT		Sealy et al., 2025
	13	10,260,574	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	13	10,128,099	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	13	9,825,770	Zv9	DIRECT		Busch-Nentwich et al., 2013
vu129	13	10,260,720	GRCz11	DIRECT		Samuel et al., 2016
sa42147	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
vu129	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	13		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	13		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
13	1401.0 cR	six3a	Goodfellow T51 (T51)	Geisler, Robert	Data
13	38.1 cM	six3a	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Markers Encoded by six3a
fc10a08 Chr: 13 Details

Genomic Feature vu129 is an allele of six3a