ZFIN ID: ZDB-GENE-030131-2281

Mapping Details

Gene Name: collagen, type IV, alpha 5 (Alport syndrome)
Symbol: col4a5
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
Vega 7 50,828,162 - 50,919,360 GRCv10
NCBI Map Viewer 7 51,103,232 - 51,194,430 GRCz11
Mapped Clones containing col4a5
DKEY-249M16 Chr: 7 Details
CH211-34M5 Chr: 7 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa1609 7 51,152,421 GRCz11 Busch-Nentwich et al., 2013
7 50,877,351 GRCz10 Busch-Nentwich et al., 2013
7 52,607,601 Zv9 Busch-Nentwich et al., 2013
sa16790 7 51,171,427 GRCz11 Busch-Nentwich et al., 2013
7 50,896,357 GRCz10 Busch-Nentwich et al., 2013
7 52,626,607 Zv9 Busch-Nentwich et al., 2013
sa21069 7 51,169,628 GRCz11 Busch-Nentwich et al., 2013
7 50,894,558 GRCz10 Busch-Nentwich et al., 2013
7 52,624,808 Zv9 Busch-Nentwich et al., 2013
sa27050 7 51,147,350 GRCz11 Busch-Nentwich et al., 2013
7 50,872,280 GRCz10 Busch-Nentwich et al., 2013
7 52,602,530 Zv9 Busch-Nentwich et al., 2013
sa34181 7 51,160,741 GRCz11 Busch-Nentwich et al., 2013
7 50,885,671 GRCz10 Busch-Nentwich et al., 2013
7 52,615,921 Zv9 Busch-Nentwich et al., 2013
sa41016 7 51,165,891 GRCz11 Busch-Nentwich et al., 2013
7 50,890,821 GRCz10 Busch-Nentwich et al., 2013
7 52,621,071 Zv9 Busch-Nentwich et al., 2013
sa41017 7 51,186,869 GRCz11 Busch-Nentwich et al., 2013
7 50,911,799 GRCz10 Busch-Nentwich et al., 2013
7 52,642,049 Zv9 Busch-Nentwich et al., 2013
la029367Tg 7 52,566,524 - 52,566,534 Zv9
s510 7 GRCz11
s530 7 GRCz11
la029367Tg 18 GRCz11
7 GRCz11
7 GRCz11
s510 7 GRCz11
7 GRCz11
7 GRCz11
7 GRCz11
18 GRCz11
s530 7 GRCz11
7 GRCz11
18 GRCz11
7 GRCz11
7 GRCz11
sa1609 18 GRCz11
7 GRCz11
7 GRCz11
sa16790 7 GRCz11
18 GRCz11
7 GRCz11
sa21069 7 GRCz11
7 GRCz11
18 GRCz11
sa27050 7 GRCz11
7 GRCz11
18 GRCz11
sa34181 7 GRCz11
7 GRCz11
18 GRCz11
sa41016 7 GRCz11
7 GRCz11
18 GRCz11
sa41017 7 GRCz11
7 GRCz11
18 GRCz11

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z8604 SSLP 7 Xiao et al., 2007
s510 Feature 7 0.0 cM Xiao et al., 2007
s530 Feature 7 0.0 cM Xiao et al., 2007

OTHER MAPPING INFORMATION
Markers Encoded by col4a5
IMAGE:6960791 Chr: 18 Details
Genomic Feature s510 is an allele of col4a5
Marker Type Chr Distance Publication / Person Comments
z8604 SSLP 7 0.1 cM Xiao et al., 2007
col4a5 GENE 7 0.0 cM Xiao et al., 2007
s530 Feature 7 Xiao et al., 2007
Genomic Feature s530 is an allele of col4a5
Marker Type Chr Distance Publication / Person Comments
col4a5 GENE 7 0.0 cM Xiao et al., 2007
z8604 SSLP 7 Xiao et al., 2007
s510 Feature 7 Xiao et al., 2007
Genomic Feature s510 is an allele of col4a5
Chr 7 Muto et al., 2005 Muto, et al. (2005. PLoS Genet. 1(5):e66.) reports mapping s510 to LG7.
Genomic Feature s530 is an allele of col4a5
Chr 7 Muto et al., 2005 Muto, et al. (2005. PLoS Genet. 1(5):e66.) reports mapping s530 to LG7.
Genomic Feature sa21069 is an allele of col4a5
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