ZFIN ID: ZDB-GENE-130530-691

Mapping Details

Gene Name:	SH3 and multiple ankyrin repeat domains 1
Symbol:	shank1

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	3	29,487,355 - 29,649,149	GRCz12tu
NCBI Map Viewer	3	29,487,355 - 29,649,149	GRCz12tu
Ensembl	3	30,714,111 - 30,861,177	GRCz11
NCBI Map Viewer	3	30,696,991 - 30,861,222	GRCz11
Vega	3	30,583,269 - 30,730,335	GRCv10

Mapped Clones containing shank1
DKEY-105I19	Chr: 3 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa12603	3	29,488,273	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,700,444	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,569,602	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,851,563	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa20033	3	29,492,833	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,705,004	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,574,162	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,856,123	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa20034	3	29,558,026	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,770,127	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,639,285	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,921,246	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa33196	3	29,489,926	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,702,097	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,571,255	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,853,216	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa33197	3	29,537,402	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,749,503	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,618,661	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,900,622	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa33198	3	29,546,540	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,758,641	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,627,799	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,909,760	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa40084	3	29,491,972	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,704,143	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,573,301	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,855,262	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa40085	3	29,533,868	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,746,039	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,615,197	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,897,158	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa40086	3	29,544,880	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,756,981	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,626,139	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,908,100	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa45142	3	29,494,033	GRCz12tu	DIRECT		Sealy et al., 2025
	3	30,706,204	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	3	30,575,362	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	3	30,857,323	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa12603	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa20033	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa20034	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa33196	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa33197	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa33198	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa40084	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa40085	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa40086	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa45142	3		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa20033 is an allele of shank1