ZFIN ID: ZDB-GENE-980526-27 |
Gene Name: | orthodenticle homeobox 2a |
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Symbol: | otx2a |
PHYSICAL MAP AND BROWSER
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Mapped Clones containing otx2a | |
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DKEYP-123H10 | Chr: 1 Details |
PHYSICAL MAPPING
Feature | Chr | Position | Assembly | Citations |
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sa12472 | 1 | 50,928,849 | GRCz11 | Busch-Nentwich et al., 2013 |
1 | 50,285,050 | GRCz10 | Busch-Nentwich et al., 2013 | |
1 | 51,438,171 | Zv9 | Busch-Nentwich et al., 2013 | |
sa19590 | 1 | 50,924,205 | GRCz11 | Busch-Nentwich et al., 2013 |
1 | 50,280,406 | GRCz10 | Busch-Nentwich et al., 2013 | |
1 | 51,433,527 | Zv9 | Busch-Nentwich et al., 2013 |
Chr | Location | Mapped As | Panel | Mapped By | Scoring |
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1 | 152.6 cM | otx3 | Mother of Pearl (MOP) | Postlethwait, John H. | Data |
1 | 453.38 cR | otx3 | Loeb/NIH/5000/4000 (LN54) | Dawid, Igor B. | Data |
1 | 6389.0 cR | otx3 | Goodfellow T51 (T51) | Geisler, Robert | Data |
1 | 82.5 cM | otx3 | Heat Shock (HS) | Woods, Ian G. | Data |
Note: Physical map location as
displayed in the genome browsers is more precise than linkage map location. Physical map location should be used whenever possible. |
Strain | Bandsize | Restriction Enzyme | Annealing Temperature [C] |
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SJD | 450 | 36.0 | |
Forward Primer | ACCACTGGCGTCCCGTCG | ||
Reverse Primer | CCGCCGCAGAGCTGAAGT |
Genomic Feature sa19590 is an allele of otx2a |