ZFIN ID: ZDB-GENE-000405-1

ZFIN ID: ZDB-GENE-000405-1

Mapping Details

Gene Name:	pre-B-cell leukemia homeobox 1a
Symbol:	pbx1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	2	21,109,089 - 21,242,268	GRCz12tu
NCBI Map Viewer	2	21,109,089 - 21,242,268	GRCz12tu
Ensembl	2	18,698,388 - 18,830,783	GRCz11
NCBI Map Viewer	2	18,698,280 - 18,830,795	GRCz11
NCBI Map Viewer	2	18,698,280 - 18,830,795	GRCz11
UCSC	2	-	GRCz11
UCSC	2	-	GRCz11
Vega	2	19,049,120 - 19,181,730	GRCv10

Mapped Clones containing pbx1a
CH211-174E12	Chr: 2 Details
CH73-250E21	Chr: 2 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa12947	2	21,145,955	GRCz12tu	DIRECT		Sealy et al., 2025
	2	18,734,981	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	19,085,713	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	19,717,702	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa14134	2	21,241,765	GRCz12tu	DIRECT		Sealy et al., 2025
	2	18,830,292	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	19,181,228	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	19,618,640	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa15504	2	21,133,665	GRCz12tu	DIRECT		Sealy et al., 2025
	2	18,722,744	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	19,073,476	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	19,729,939	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa17065	2	21,125,496	GRCz12tu	DIRECT		Sealy et al., 2025
	2	18,714,574	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	19,065,306	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	19,738,109	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa31272	2	21,125,403	GRCz12tu	DIRECT		Sealy et al., 2025
	2	18,714,481	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	19,065,213	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	19,738,202	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa32888	2	21,125,467	GRCz12tu	DIRECT		Sealy et al., 2025
	2	18,714,545	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	2	19,065,277	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	2	19,738,138	Zv9	DIRECT		Busch-Nentwich et al., 2013
mn0016Gt	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa12947	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa14134	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa15504	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa17065	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa31272	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa32888	2		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	2		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
2	223.82 cR	pbx1b	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
2	249.98 cR	pbx1a	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa12947 is an allele of pbx1a