ZFIN ID: ZDB-GENE-990415-169

ZFIN ID: ZDB-GENE-990415-169

Mapping Details

Gene Name:	netrin 1a
Symbol:	ntn1a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	6	25,870,411 - 25,993,479	GRCz12tu
NCBI Map Viewer	6	25,870,411 - 25,993,479	GRCz12tu
Ensembl	6	19,804,048 - 19,926,657	GRCz11
NCBI Map Viewer	6	19,804,048 - 19,926,785	GRCz11
UCSC	6	-	GRCz11
Vega	6	23,332,727 - 23,455,336	GRCv10

Mapped Clones containing ntn1a
CH211-279I13	Chr: 6 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
nni1	6	19,925,998 - 19,926,002	GRCz11	DIRECT		Hardy et al., 2019
sa12269	6	25,895,641	GRCz12tu	DIRECT		Sealy et al., 2025
	6	19,829,100	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	6	23,357,779	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	6	18,096,503	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa14131	6	25,992,115	GRCz12tu	DIRECT		Sealy et al., 2025
	6	19,925,421	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	6	23,454,100	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	6	18,000,182	Zv9	DIRECT		Busch-Nentwich et al., 2013
sa40663	6	25,912,672	GRCz12tu	DIRECT		Sealy et al., 2025
	6	19,846,130	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	6	23,374,809	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	6	18,079,473	Zv9	DIRECT		Busch-Nentwich et al., 2013
la015834Tg	6	18,099,389 - 18,099,399	Zv9	ZFIN_Zv9	BurgessLin
la025409Tg	6	18,088,907 - 18,088,917	Zv9	ZFIN_Zv9	BurgessLin
la025410Tg	6	18,092,413 - 18,092,423	Zv9	ZFIN_Zv9	BurgessLin
la025411Tg	6	18,094,825 - 18,094,835	Zv9	ZFIN_Zv9	BurgessLin
la015834Tg	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
la025409Tg	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
la025410Tg	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
la025411Tg	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
nni1	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa12269	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
sa14131	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
sa40663	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
zf3231	6		GRCz11	OTHER_MAPPING	Feature location obtained from related gene that has mapped_marker info
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	6		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
6	83.1 cM	netrin1a	Mother of Pearl (MOP)	Postlethwait, John H.	Data
6	57.77 cM	ntn1a	Gates et al (GAT)	Talbot, William S.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION: No data available

Genomic Feature sa12269 is an allele of ntn1a