ZFIN ID: ZDB-GENE-030910-3

Mapping Details

Gene Name:	cadherin 17, LI cadherin (liver-intestine)
Symbol:	cdh17

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	16	29,897,246 - 29,925,867	GRCz12tu
NCBI Map Viewer	16	29,897,246 - 29,925,867	GRCz12tu
Ensembl	16	26,774,182 - 26,802,798	GRCz11
NCBI Map Viewer	16	26,774,177 - 26,802,798	GRCz11
UCSC	16	-	GRCz11
UCSC	16	-	GRCz11
Vega	16	26,900,740 - 26,929,356	GRCv10

Mapped Clones containing cdh17
CH211-79L20	Chr: 16 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa11932	16	26,796,590	GRCz11	Busch-Nentwich et al., 2013
	16	26,923,148	GRCz10	Busch-Nentwich et al., 2013
	16	29,047,374	Zv9	Busch-Nentwich et al., 2013
sa14279	16	26,793,015	GRCz11	Busch-Nentwich et al., 2013
	16	26,919,573	GRCz10	Busch-Nentwich et al., 2013
	16	29,043,799	Zv9	Busch-Nentwich et al., 2013
sa32091	16	26,782,380	GRCz11	Busch-Nentwich et al., 2013
	16	26,908,938	GRCz10	Busch-Nentwich et al., 2013
	16	29,033,164	Zv9	Busch-Nentwich et al., 2013
sa36153	16	26,784,683	GRCz11	Busch-Nentwich et al., 2013
	16	26,911,241	GRCz10	Busch-Nentwich et al., 2013
	16	29,035,467	Zv9	Busch-Nentwich et al., 2013
sa11932	16		GRCz11
	16		GRCz11
	16		GRCz11
sa14279	16		GRCz11
	16		GRCz11
	16		GRCz11
sa32091	16		GRCz11
	16		GRCz11
	16		GRCz11
sa36153	16		GRCz11
	16		GRCz11
	16		GRCz11

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
fb65d02	EST	16	0.0 cM	Horsfield et al., 2002	Horsfield et al. (2002., Mechanisms of Development 115:15-26) report that cdh17 corresponds to EST fb65d02.x1. fb65d02.x1 maps to LG16. This EST is a chimeric EST. fb65d02.x1 is 200 kB from the end of ensembl contig ctg26601. The best match for fb65d02.y1 is ensmbl ctg10670.

Markers Encoded by cdh17
fb65d02 Chr: 16 Details

Genomic Feature sa11932 is an allele of cdh17