ZFIN ID: ZDB-GENE-050214-1

Mapping Details

Gene Name: protocadherin-related 15b
Symbol: pcdh15b
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 12 7,085,194 - 7,591,857 GRCz12tu
NCBI Map Viewer 12 7,085,194 - 7,591,857 GRCz12tu
Ensembl 12 6,566,233 - 6,905,375 GRCz11
Ensembl 12 6,542,789 - 6,551,681 GRCz11
NCBI Map Viewer 12 6,566,233 - 6,905,591 GRCz11
UCSC 12 - GRCz11
Vega 12 6,509,286 - 6,518,178 GRCv10
Vega 12 6,532,730 - 6,871,872 GRCv10
Mapped Clones containing pcdh15b
CH211-200L21 Chr: 12 Details
DKEY-93D9 Chr: 12 Details
CH211-253P2 Chr: 12 Details
CH73-277C13 Chr: 12 Details
CH211-117C16 Chr: 12 Details
CH73-210E1 Chr: 12 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa22026 12 7,111,132 GRCz12tu DIRECT Sealy et al., 2025
12 6,566,451 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 6,532,948 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 7,250,217 Zv9 DIRECT Busch-Nentwich et al., 2013
sa22027 12 7,111,588 GRCz12tu DIRECT Sealy et al., 2025
12 6,566,907 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 6,533,404 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 7,250,673 Zv9 DIRECT Busch-Nentwich et al., 2013
sa27884 12 7,087,677 GRCz12tu DIRECT Sealy et al., 2025
12 6,545,250 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 6,511,747 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 7,229,016 Zv9 DIRECT Busch-Nentwich et al., 2013
sa30955 12 7,189,304 GRCz12tu DIRECT Sealy et al., 2025
12 6,642,239 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 6,608,736 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 7,326,005 Zv9 DIRECT Busch-Nentwich et al., 2013
sa35208 12 7,313,951 GRCz12tu DIRECT Sealy et al., 2025
12 6,767,715 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 6,734,212 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 7,451,481 Zv9 DIRECT Busch-Nentwich et al., 2013
sa45449 12 7,111,981 GRCz12tu DIRECT Sealy et al., 2025
12 6,567,300 GRCz11 DIRECT Busch-Nentwich et al., 2013
12 6,533,797 GRCz10 DIRECT Busch-Nentwich et al., 2013
12 7,251,066 Zv9 DIRECT Busch-Nentwich et al., 2013
uot14 12 6,805,982 - 6,805,988 GRCz11 DIRECT Miles et al., 2021
uot15 12 6,805,984 - 6,805,985 GRCz11 DIRECT Miles et al., 2021
la018346Tg 12 7,260,131 - 7,260,141 Zv9 ZFIN_Zv9 BurgessLin
la018347Tg 12 7,474,596 - 7,474,606 Zv9 ZFIN_Zv9 BurgessLin
la018346Tg 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
la018347Tg 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa22026 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa22027 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa27884 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa30955 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa35208 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa45449 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
uot14 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
uot15 12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
12 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
dkk1b GENE 12 Seiler et al., 2005 Seiler, et al.(2005. Development 132:615-623) reports mapping pcdh15b to LG12  ...
z1473 SSLP 12 Seiler et al., 2005 Seiler, et al.(2005. Development 132:615-623) reports mapping pcdh15b to LG12  ...

OTHER MAPPING INFORMATION
Chr 12 Seiler et al., 2005 Seiler, et al.(2005. Development 132:615-623) reports mapping pcdh15b to LG12 between dkk1 and  ...
Genomic Feature la018347Tg is an allele of pcdh15b
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