ZFIN ID: ZDB-GENE-060526-68

Mapping Details

Gene Name: Fraser extracellular matrix complex subunit 1
Symbol: fras1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 5 39,741,917 - 39,991,670 GRCz12tu
NCBI Map Viewer 5 39,741,917 - 39,991,670 GRCz12tu
Ensembl 5 38,913,621 - 39,086,768 GRCz11
NCBI Map Viewer 5 38,837,198 - 39,086,779 GRCz11
UCSC 5 - GRCz11
Vega 5 38,313,468 - 38,486,615 GRCv10
Mapped Clones containing fras1
DKEY-29B15 Chr: 5 Details
CH211-132F12 Chr: 5 Details
CH211-191A6 Chr: 5 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa14516 5 39,971,151 GRCz12tu DIRECT Sealy et al., 2025
5 39,066,260 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,466,107 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,666,717 Zv9 DIRECT Busch-Nentwich et al., 2013
sa17510 5 39,861,822 GRCz12tu DIRECT Sealy et al., 2025
5 38,956,968 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,356,815 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,557,425 Zv9 DIRECT Busch-Nentwich et al., 2013
sa20491 5 39,917,691 GRCz12tu DIRECT Sealy et al., 2025
5 39,012,798 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,412,645 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,613,255 Zv9 DIRECT Busch-Nentwich et al., 2013
sa20492 5 39,987,911 GRCz12tu DIRECT Sealy et al., 2025
5 39,083,020 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,482,867 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,683,477 Zv9 DIRECT Busch-Nentwich et al., 2013
sa20493 5 39,989,988 GRCz12tu DIRECT Sealy et al., 2025
5 39,085,097 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,484,944 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,685,554 Zv9 DIRECT Busch-Nentwich et al., 2013
sa25308 5 39,990,046 GRCz12tu DIRECT Sealy et al., 2025
5 39,085,155 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,485,002 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,685,612 Zv9 DIRECT Busch-Nentwich et al., 2013
sa26535 5 39,907,462 GRCz12tu DIRECT Sealy et al., 2025
5 39,002,568 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,402,415 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,603,025 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33662 5 39,840,072 GRCz12tu DIRECT Sealy et al., 2025
5 38,935,201 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,335,048 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,535,658 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33663 5 39,930,692 GRCz12tu DIRECT Sealy et al., 2025
5 39,025,801 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,425,648 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,626,258 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33664 5 39,956,059 GRCz12tu DIRECT Sealy et al., 2025
5 39,051,168 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,451,015 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,651,625 Zv9 DIRECT Busch-Nentwich et al., 2013
sa40517 5 39,861,842 GRCz12tu DIRECT Sealy et al., 2025
5 38,956,988 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,356,835 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,557,445 Zv9 DIRECT Busch-Nentwich et al., 2013
sa45217 5 39,971,467 GRCz12tu DIRECT Sealy et al., 2025
5 39,066,576 GRCz11 DIRECT Busch-Nentwich et al., 2013
5 38,466,423 GRCz10 DIRECT Busch-Nentwich et al., 2013
5 40,667,033 Zv9 DIRECT Busch-Nentwich et al., 2013
te262d 5 39,034,615 GRCz11 DIRECT Carney et al., 2010
la025056Tg 5 40,501,806 - 40,501,816 Zv9 ZFIN_Zv9 BurgessLin
la025057Tg 5 40,633,364 - 40,633,374 Zv9 ZFIN_Zv9 BurgessLin
b1048 5 GRCz11 GENERAL_LOAD load data [singleton]
b1130 5 GRCz11 GENERAL_LOAD load data [singleton]
te262d 5 GRCz11 GENERAL_LOAD load data [singleton]
tm95b 5 GRCz11 GENERAL_LOAD load data [singleton]
b1048 5 GRCz11 OTHER_MAPPING linkagesDirectMem1
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING linkagesDirectMem2
b1130 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING linkagesDirectMem1
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING linkagesDirectMem2
la025056Tg 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la025057Tg 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
mn0156Gt 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa14516 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa17510 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa20491 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa20492 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa20493 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
sa25308 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa26535 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa33662 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa33663 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa33664 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa40517 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa45217 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
te262d 5 GRCz11 OTHER_MAPPING linkagesDirectMem2
5 GRCz11 OTHER_MAPPING linkagesDirectMem1
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tj16 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
tm95b 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING linkagesDirectMem1
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
5 GRCz11 OTHER_MAPPING linkagesDirectMem2
tr274 5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
5 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z6981 SSLP 5 Carney et al., 2010
z8122 SSLP 5 Carney et al., 2010
b1130 Feature 5 Carney et al., 2010
tm95b Feature 5 Carney et al., 2010
te262d Feature 5 Carney et al., 2010
b1048 Feature 5 Carney et al., 2010

OTHER MAPPING INFORMATION
Chr 5 Carney et al., 2010
Markers Encoded by fras1
fc10b09 Chr: 5 Details
Genomic Feature b1130 is an allele of fras1
Marker Type Chr Distance Publication / Person Comments
b1048 Feature 5 Carney et al., 2010
tm95b Feature 5 Carney et al., 2010
te262d Feature 5 Carney et al., 2010
fras1 GENE 5 Carney et al., 2010
z6981 SSLP 5 Carney et al., 2010
z8122 SSLP 5 Carney et al., 2010
Genomic Feature b1048 is an allele of fras1
Marker Type Chr Distance Publication / Person Comments
tm95b Feature 5 Carney et al., 2010
te262d Feature 5 Carney et al., 2010
fras1 GENE 5 Carney et al., 2010
z6981 SSLP 5 Carney et al., 2010
z8122 SSLP 5 Carney et al., 2010
b1130 Feature 5 Carney et al., 2010
Genomic Feature tm95b is an allele of fras1
Marker Type Chr Distance Publication / Person Comments
te262d Feature 5 Carney et al., 2010
fras1 GENE 5 Carney et al., 2010
z6981 SSLP 5 Carney et al., 2010
z8122 SSLP 5 Carney et al., 2010
b1048 Feature 5 Carney et al., 2010
b1130 Feature 5 Carney et al., 2010
Genomic Feature te262d is an allele of fras1
Marker Type Chr Distance Publication / Person Comments
fras1 GENE 5 Carney et al., 2010
z6981 SSLP 5 Carney et al., 2010
z8122 SSLP 5 Carney et al., 2010
b1130 Feature 5 Carney et al., 2010
tm95b Feature 5 Carney et al., 2010
b1048 Feature 5 Carney et al., 2010
Genomic Feature b1130 is an allele of fras1
Chr 5 Carney et al., 2010
Genomic Feature tm95b is an allele of fras1
Chr 5 Carney et al., 2010
Genomic Feature te262d is an allele of fras1
Chr 5 Carney et al., 2010
Genomic Feature b1048 is an allele of fras1
Chr 5 Carney et al., 2010
Genomic Feature la025056Tg is an allele of fras1
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