ZFIN ID: ZDB-GENE-030131-966

Mapping Details

Gene Name:	ubiquitin specific peptidase 39
Symbol:	usp39

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	5	74,851,470 - 74,868,898	GRCz12tu
NCBI Map Viewer	5	74,851,470 - 74,868,898	GRCz12tu
Ensembl	5	68,826,514 - 68,843,111	GRCz11
NCBI Map Viewer	5	68,826,531 - 68,843,111	GRCz11
UCSC	5	-	GRCz11
Vega	5	68,055,847 - 68,072,444	GRCv10

Mapped Clones containing usp39
CH211-283H6	Chr: 5 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	DetailedSource	Citations
sa40605	5	74,857,875	GRCz12tu	DIRECT		Sealy et al., 2025
	5	68,833,205	GRCz11	DIRECT		Busch-Nentwich et al., 2013
	5	68,062,538	GRCz10	DIRECT		Busch-Nentwich et al., 2013
	5	71,737,920	Zv9	DIRECT		Busch-Nentwich et al., 2013
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
zf232	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneGBrowse
	5		GRCz11	OTHER_MAPPING	linkagesDirectMem2
	5		GRCz11	OTHER_MAPPING	linkagesDirectMem1
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGenePaneledMarkers
	5		GRCz11	OTHER_MAPPING	featureLocationPullThruFromGeneLinkage

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
ndrg3a	GENE	5		Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
ephb4a	GENE	5		Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
z34450	SSLP	5		Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
zf232	Feature	5	0.0 cM	Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
pax8	GENE	5		Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.

Markers Encoded by usp39
fb54d10 Chr: 5 Details
fb79f05 Chr: 5 Details

Genomic Feature zf232 is an allele of usp39

Marker	Type	Chr	Distance	Publication / Person	Comments
ephb4a	GENE	5	2.0 cM	Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
ndrg3a	GENE	5	0.3 cM	Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
usp39	GENE	5	0.0 cM	Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
z34450	SSLP	5	2.4 cM	Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.
pax8	GENE	5	12.0 cM	Ríos et al., 2011	Rios, Y. et al.(2011, PLoS Genet. 7(1):e1001271) mapped zf232 (hp689) to the region of usp39 on Chr. 5.

Genomic Feature zf232 is an allele of usp39