ZFIN ID: ZDB-GENE-000329-5

Mapping Details

Gene Name: notch receptor 3
Symbol: notch3
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 3 56,055,121 - 56,088,529 GRCz12tu
NCBI Map Viewer 3 56,055,121 - 56,088,529 GRCz12tu
Ensembl 3 53,529,714 - 53,559,408 GRCz11
NCBI Map Viewer 3 53,529,714 - 53,559,408 GRCz11
UCSC 3 - GRCz11
Vega 3 53,275,051 - 53,304,745 GRCv10
Mapped Clones containing notch3
CH211-69E21 Chr: 3 Details
DKEY-18G4 Chr: 3 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
ion36h 3 53,534,976 - 53,534,983 GRCz11 DIRECT Jin et al., 2022
sa14943 3 56,071,265 GRCz12tu DIRECT Sealy et al., 2025
3 53,542,223 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,287,560 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,180,245 Zv9 DIRECT Busch-Nentwich et al., 2013
sa16743 3 56,069,729 GRCz12tu DIRECT Sealy et al., 2025
3 53,540,666 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,286,003 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,178,688 Zv9 DIRECT Busch-Nentwich et al., 2013
sa20147 3 56,059,993 GRCz12tu DIRECT Sealy et al., 2025
3 53,534,589 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,279,926 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,172,611 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33320 3 56,059,545 GRCz12tu DIRECT Sealy et al., 2025
3 53,534,145 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,279,482 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,172,167 Zv9 DIRECT Busch-Nentwich et al., 2013
sa33321 3 56,088,252 GRCz12tu DIRECT Sealy et al., 2025
3 53,559,131 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,304,468 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,197,153 Zv9 DIRECT Busch-Nentwich et al., 2013
sa40169 3 53,534,567 GRCz11 DIRECT Busch-Nentwich et al., 2013
3 53,279,904 GRCz10 DIRECT Busch-Nentwich et al., 2013
3 54,172,589 Zv9 DIRECT Busch-Nentwich et al., 2013
la010071Tg 3 54,190,525 - 54,190,535 Zv9 ZFIN_Zv9 BurgessLin
la015265Tg 3 54,190,263 - 54,190,273 Zv9 ZFIN_Zv9 BurgessLin
la024295Tg 3 54,190,411 - 54,190,421 Zv9 ZFIN_Zv9 BurgessLin
la028945Tg 3 54,190,337 - 54,190,347 Zv9 ZFIN_Zv9 BurgessLin
st51 3 GRCz11 GENERAL_LOAD load data [singleton]
fh332 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
fh334 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
ion36h 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
ip14Tg 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la010071Tg 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
la015265Tg 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
la024295Tg 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
la028945Tg 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
notch3_unrecovered 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa14943 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa16743 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa20147 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa33320 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa33321 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa40169 3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
st51 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
zm197263Tg 3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
3 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
3 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
3 146.1 cM notch3 Mother of Pearl (MOP) Postlethwait, John H. Data
3 147.3 cM notch5_sum Mother of Pearl (MOP) Postlethwait, John H. Data
3 82.0 cM notch3 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.

OTHER MAPPING INFORMATION
Genomic Feature st51 is an allele of notch3
Chr 3 Pogoda et al., 2006 As stated by Pogoda et al (2006), mutations were mapped to linkage groups by bulked segregant  ...
Genomic Feature fh332 is an allele of notch3
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.