ZFIN ID: ZDB-GENE-980526-268

Mapping Details

Gene Name: GATA binding protein 1a
Symbol: gata1a
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 11 27,483,188 - 27,491,103 GRCz12tu
NCBI Map Viewer 11 27,483,188 - 27,491,103 GRCz12tu
Ensembl 11 25,411,914 - 25,418,856 GRCz11
NCBI Map Viewer 11 25,410,952 - 25,418,867 GRCz11
UCSC 11 - GRCz11
Vega 11 25,174,298 - 25,181,240 GRCv10
Mapped Clones containing gata1a
DKEYP-97E7 Chr: 11 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
sa1048 11 27,491,000 GRCz12tu DIRECT Sealy et al., 2025
11 25,418,764 GRCz11 DIRECT Busch-Nentwich et al., 2013
11 25,181,148 GRCz10 DIRECT Busch-Nentwich et al., 2013
11 26,352,323 Zv9 DIRECT Busch-Nentwich et al., 2013
sa18633 11 27,486,739 GRCz12tu DIRECT Sealy et al., 2025
11 25,414,503 GRCz11 DIRECT Busch-Nentwich et al., 2013
11 25,176,887 GRCz10 DIRECT Busch-Nentwich et al., 2013
11 26,348,062 Zv9 DIRECT Busch-Nentwich et al., 2013
cig8Tg 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
hg2 11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
hg3 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
ihb509 11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
ihb532 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
m651 11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa1048 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
sa18633 11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
11 GRCz11 OTHER_MAPPING Feature location obtained from related gene that has mapped_marker info
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
11 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers

GENETIC MAPPING PANELS
Chr Location Mapped As Panel Mapped By Scoring
11 91.0 cM gata1 Mother of Pearl (MOP) Postlethwait, John H. Data
11 48.0 cM gata1 Heat Shock (HS) Woods, Ian G. Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z22766 SSLP 11 1.6 cM Lyons et al., 2002 The vltm651 gene was mapped to linkage group 11 (LG11)through half-tetrad analysis
z4190 SSLP 11 1.0 cM Lyons et al., 2002 The vltm651 gene was mapped to linkage group 11 (LG11)through half-tetrad analysis

OTHER MAPPING INFORMATION
Primer Sets:
Strain Bandsize Restriction Enzyme Annealing Temperature [C]
C32
Forward Primer GGCCTTTATTTTAAACTA
Reverse Primer
SJD 214 36.0
Forward Primer GGCCTTTATTTTAAACTG
Reverse Primer
Genomic Feature hg3 is an allele of gata1a
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