Mapping Details

Genome Browser Chr Position Assembly ZFIN JBrowse 20 40,715,163 - 40,720,530 GRCz11 Ensembl 20 40,715,163 - 40,720,530 GRCz11 Vega 20 40,818,053 - 40,823,420 GRCv10 NCBI Map Viewer 20 40,715,163 - 40,720,453 GRCz11 UCSC 20 - GRCz11

Mapped Clones containing gja1b
DKEY-261A18	Chr: 20 Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
20	94.6 cM	cx43	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
gja13.1	GENE	20		Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically  ... Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. Connexins in the fish specific clade containing cx32.3, cx31.9, cx28.9, cx28.1 and cx34.5 are physically linked and adjacent to one another and also linked to a cx43, a less related connexin.
gja13.2	GENE	20		Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically  ... Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. Connexins in the fish specific clade containing cx32.3, cx31.9, cx28.9, cx28.1 and cx34.5 are physically linked and adjacent to one another and also linked to a cx43, a less related connexin.
gja11	GENE	20		Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically  ... Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. Connexins in the fish specific clade containing cx32.3, cx31.9, cx28.9, cx28.1 and cx34.5 are physically linked and adjacent to one another and also linked to a cx43, a less related connexin.
gja12.1	GENE	20		Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically  ... Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. Connexins in the fish specific clade containing cx32.3, cx31.9, cx28.9, cx28.1 and cx34.5 are physically linked and adjacent to one another and also linked to a cx43, a less related connexin.
gja12.2	GENE	20		Eastman et al., 2006	Eastman et al (Genomics 87(2):265-274) identified clusters of physically  ... Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. Connexins in the fish specific clade containing cx32.3, cx31.9, cx28.9, cx28.1 and cx34.5 are physically linked and adjacent to one another and also linked to a cx43, a less related connexin.
gja13.1	GENE	20		Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.
z20046	SSLP	20		Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region between SSLP markers z20046 and z63495.
b123	Feature	20		Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region between SSLP markers z20046 and z63495.
gja11	GENE	20		Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.
gja13.2	GENE	20		Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.
gja12.2	GENE	20		Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.
gja12.1	GENE	20		Iovine et al., 2005	Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.

OTHER MAPPING INFORMATION

Chr 20 Iovine et al., 2005 Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region  ... Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region between SSLP markers z20046 and z63495.   Chr 20 Iovine et al., 2005 Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa,  ... Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping gjaa, gjab,gjac,gjadp,gjae and gja1 to Chr. 20 by sequencing BAC DKEY-261A18.   Chr 20 Eastman et al., 2006 Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins.  ... Eastman et al (Genomics 87(2):265-274) identified clusters of physically linked connexins. Connexins in the fish specific clade containing cx32.3, cx31.9, cx28.9, cx28.1 and cx34.5 are physically linked and adjacent to one another and also linked to a cx43, a less related connexin.

Genomic Feature b123 is an allele of gja1b
Marker Type Chr Distance Publication / Person Comments gja1b GENE 20 Iovine et al., 2005 Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region between SSLP markers z20046 and z63495. z20046 SSLP 20 Iovine et al., 2005 Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region between SSLP markers z20046 and z63495.

Genomic Feature b123 is an allele of gja1b
Chr 20 Iovine et al., 2005 Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region  ... Iovine, et al. (2005. Dev Biol 278:208-219) reports mapping shf to LG20 to a 1.3cM region between SSLP markers z20046 and z63495.