ZFIN ID: ZDB-GENE-030131-2281

ZFIN ID: ZDB-GENE-030131-2281

Mapping Details

Gene Name:	collagen, type IV, alpha 5 (Alport syndrome)
Symbol:	col4a5

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN	7	52,946,887 - 53,038,103	GRCz12tu
NCBI Map Viewer	7	52,946,887 - 53,038,103	GRCz12tu
Ensembl	7	51,103,232 - 51,194,430	GRCz11
NCBI Map Viewer	7	51,103,232 - 51,194,430	GRCz11
UCSC	7	-	GRCz11
Vega	7	50,828,162 - 50,919,360	GRCv10

Mapped Clones containing col4a5
DKEY-249M16	Chr: 7 Details
CH211-34M5	Chr: 7 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Source	Citations
sa1609	7	52,996,094	GRCz12tu	DIRECT	Sealy et al., 2025
	7	51,152,421	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	7	50,877,351	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	7	52,607,601	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa16790	7	53,015,100	GRCz12tu	DIRECT	Sealy et al., 2025
	7	51,171,427	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	7	50,896,357	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	7	52,626,607	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa21069	7	53,013,301	GRCz12tu	DIRECT	Sealy et al., 2025
	7	51,169,628	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	7	50,894,558	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	7	52,624,808	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa27050	7	52,991,023	GRCz12tu	DIRECT	Sealy et al., 2025
	7	51,147,350	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	7	50,872,280	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	7	52,602,530	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa34181	7	53,004,414	GRCz12tu	DIRECT	Sealy et al., 2025
	7	51,160,741	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	7	50,885,671	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	7	52,615,921	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa41016	7	53,009,564	GRCz12tu	DIRECT	Sealy et al., 2025
	7	51,165,891	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	7	50,890,821	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	7	52,621,071	Zv9	DIRECT	Busch-Nentwich et al., 2013
sa41017	7	53,030,542	GRCz12tu	DIRECT	Sealy et al., 2025
	7	51,186,869	GRCz11	DIRECT	Busch-Nentwich et al., 2013
	7	50,911,799	GRCz10	DIRECT	Busch-Nentwich et al., 2013
	7	52,642,049	Zv9	DIRECT	Busch-Nentwich et al., 2013
la029367Tg	7	52,566,524 - 52,566,534	Zv9	ZFIN_Zv9
	7		GRCz11	OTHER_MAPPING	ZFIN Curated Data
s510	7		GRCz11	OTHER_MAPPING	ZFIN Curated Data
s530	7		GRCz11	OTHER_MAPPING	ZFIN Curated Data

GENETIC MAPPING PANELS: No data available

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person
z8604	SSLP	7		Xiao et al., 2007
s510	Feature	7	0.0 cM	Xiao et al., 2007
s530	Feature	7	0.0 cM	Xiao et al., 2007

Genomic Feature s510 is an allele of col4a5

Chr 7

Muto et al., 2005

Muto, et al. (2005. PLoS Genet. 1(5):e66.) reports mapping s510 to LG7.

Genomic Feature s510 is an allele of col4a5