ZFIN ID: ZDB-GENE-040709-2

Mapping Details

Gene Name: cleavage and polyadenylation specific factor 1
Symbol: cpsf1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN 19 13,001,222 - 13,054,475 GRCz12tu
NCBI Map Viewer 19 13,001,222 - 13,054,475 GRCz12tu
Ensembl 19 11,897,631 - 11,975,164 GRCz11
NCBI Map Viewer 19 11,897,631 - 11,950,437 GRCz11
UCSC 19 - GRCz11
Vega 19 11,979,289 - 12,032,092 GRCv10
Mapped Clones containing cpsf1
CH211-169C1 Chr: 19 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Source DetailedSource Citations
hi2675Tg 19 11,949,906 - 11,949,907 GRCz11 DIRECT ZFIN Curated Data
sa16124 19 13,021,738 GRCz12tu DIRECT Sealy et al., 2025
19 11,917,776 GRCz11 DIRECT Busch-Nentwich et al., 2013
19 11,999,434 GRCz10 DIRECT Busch-Nentwich et al., 2013
19 12,541,088 Zv9 DIRECT Busch-Nentwich et al., 2013
sa23476 19 13,048,189 GRCz12tu DIRECT Sealy et al., 2025
19 11,944,149 GRCz11 DIRECT Busch-Nentwich et al., 2013
19 12,025,807 GRCz10 DIRECT Busch-Nentwich et al., 2013
19 12,567,461 Zv9 DIRECT Busch-Nentwich et al., 2013
sa29173 19 13,042,169 GRCz12tu DIRECT Sealy et al., 2025
19 11,938,207 GRCz11 DIRECT Busch-Nentwich et al., 2013
19 12,019,865 GRCz10 DIRECT Busch-Nentwich et al., 2013
19 12,561,519 Zv9 DIRECT Busch-Nentwich et al., 2013
sa36798 19 13,048,984 GRCz12tu DIRECT Sealy et al., 2025
19 11,944,944 GRCz11 DIRECT Busch-Nentwich et al., 2013
19 12,026,602 GRCz10 DIRECT Busch-Nentwich et al., 2013
19 12,568,256 Zv9 DIRECT Busch-Nentwich et al., 2013
sa44909 19 13,054,331 GRCz12tu DIRECT Sealy et al., 2025
19 11,950,293 GRCz11 DIRECT Busch-Nentwich et al., 2013
19 12,031,951 GRCz10 DIRECT Busch-Nentwich et al., 2013
19 12,573,605 Zv9 DIRECT Busch-Nentwich et al., 2013
zdfI8a12 19 11,940,089 GRCz11 DIRECT Bolli et al., 2011
19 GRCz11 GENERAL_LOAD load data [singleton]
hi2675Tg 19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa16124 19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
sa23476 19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa29173 19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa36798 19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
sa44909 19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
zdfI8a12 19 GRCz11 OTHER_MAPPING linkagesDirectMem2
19 GRCz11 OTHER_MAPPING linkagesDirectMem1
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneLinkage
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGenePaneledMarkers
19 GRCz11 OTHER_MAPPING featureLocationPullThruFromGeneGBrowse

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z11989 SSLP 19 Bolli et al., 2011 Boli, N. et al. (2011, Blood. 117(5):3996-4007) mapped zdf18a12 to cpsf1 using bulk segregant analysis and molecular analysis.
z3816 SSLP 19 Bolli et al., 2011 Boli, N. et al. (2011, Blood. 117(5):3996-4007) mapped zdf18a12 to cpsf1 using bulk segregant analysis and molecular analysis.
zdfI8a12 Feature 19 Bolli et al., 2011 Boli, N. et al. (2011, Blood. 117(5):3996-4007) mapped zdf18a12 to cpsf1 using bulk segregant analysis and molecular analysis.

OTHER MAPPING INFORMATION
Chr 19 Bolli et al., 2011 Boli, N. et al. (2011, Blood. 117(5):3996-4007) mapped zdf18a12 to cpsf1 using bulk  ...
Markers Encoded by cpsf1
fb24c01 Chr: 19 Details
Genomic Feature zdfI8a12 is an allele of cpsf1
Marker Type Chr Distance Publication / Person Comments
cpsf1 GENE 19 Bolli et al., 2011 Boli, N. et al. (2011, Blood. 117(5):3996-4007) mapped zdf18a12 to cpsf1 using bulk segregant analysis and molecular analysis.
z11989 SSLP 19 Bolli et al., 2011 Boli, N. et al. (2011, Blood. 117(5):3996-4007) mapped zdf18a12 to cpsf1 using bulk segregant analysis and molecular analysis.
z3816 SSLP 19 Bolli et al., 2011 Boli, N. et al. (2011, Blood. 117(5):3996-4007) mapped zdf18a12 to cpsf1 using bulk segregant analysis and molecular analysis.
Genomic Feature zdfI8a12 is an allele of cpsf1
Chr 19 Bolli et al., 2011 Boli, N. et al. (2011, Blood. 117(5):3996-4007) mapped zdf18a12 to cpsf1 using bulk  ...
Genomic Feature hi2675Tg is an allele of cpsf1
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