Mapping Details

Genome Browser Chr Position Assembly ZFIN JBrowse 1 1,712,140 - 1,731,564 GRCz11 Ensembl 1 1,712,140 - 1,731,564 GRCz11 Vega 1 1,564,346 - 1,645,577 GRCv10 NCBI Map Viewer 1 1,712,169 - 1,731,564 GRCz11 UCSC 1 - GRCz11

Mapped Clones containing atp1a1a.1
DKEY-208K14	Chr: 1 Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
1	0.0 cM	atp1a1a_1	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z9382	SSLP	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.
z9394	SSLP	1		Rajarao et al., 2001	Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.

OTHER MAPPING INFORMATION

Chr 1 Rajarao et al., 2001 Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and  ... Rajarao, et al. (2001. Genome Res 11:1211-1220.) report mapping atp1a1a.1 to LG01 between z9382 and z9394 on one or more of the T51, LN54, or Heat Shock mapping panels.

Markers Encoded by atp1a1a.1
fa03c03 Chr: 1 Details

Genomic Feature to273a is an allele of atp1a1a.1
Chr Location Mapped As Panel Mapped By Scoring 1 8.5 cM to273a Boston MGH Cross (MGH) Geisler, Robert Data Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Genomic Feature la1 is an allele of atp1a1a.1
Marker Type Chr Distance Publication / Person Comments z6384 SSLP 1 0.12 cM Shu et al., 2003 Shu et al. (2003, Development 130(25):6165-6173) mapped heart and mind (had) to LG1 close to SSLP z6384 using a meiotic mapping panel.

Genomic Feature m883 is an allele of atp1a1a.1

Marker Type Chr Distance Publication / Person Comments z6384 SSLP 1 Ellertsdottir et al., 2006 Fine mapping with a single embryo panel representing 246 meioses revealed no  ... Fine mapping with a single embryo panel representing 246 meioses revealed no recombination events between m883 and the markers z12036 and z6384 at 7.4 cM on chromosome 1.   z12036 SSLP 1 Ellertsdottir et al., 2006 Fine mapping with a single embryo panel representing 246 meioses revealed no  ... Fine mapping with a single embryo panel representing 246 meioses revealed no recombination events between m883 and the markers z12036 and z6384 at 7.4 cM on chromosome 1.

Genomic Feature m883 is an allele of atp1a1a.1
Chr 1 Ellertsdottir et al., 2006 Fine mapping with a single embryo panel representing 246 meioses revealed no recombination events  ... Fine mapping with a single embryo panel representing 246 meioses revealed no recombination events between m883 and the markers z12036 and z6384 at 7.4 cM on chromosome 1.