Genomic Feature

rdd1

ID
ZDB-ALT-231023-2
Name
rdd1
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Chatti Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 2: 269843 - 269942 (GRCz11) (1) Details
Nucleotide change
AAGGGAAAGCTGCAGCTCCCGGTGAACCGCTGGAGCCGCCGGCAGGTCATTTTATGCGGCACGTGTCTGATGGTGTCCTCGGTGAAGGCCAGCCATACGG/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
100 bp deleted (1)
Transcript Consequence
Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
AGTACTGAGTGCTGAATTCCACAGTCATGATGAACTAGAGATATTACTGTCACTGTGAAGGTGAAGTGCTCTGCATCAGAATGAATGGCATATAAACAAACATATAATGACACCATGCCCAGTGCATTAACACAGGAGGAGTGTGTGCTGCAGGTGGCTTGTCGAGCCCACTCACCTGCATGGAGCACACTTATGCATCCTATGTATGTCAAAAAAAAACCGGTCTTTAATCAAGATTTGAACTGAGAGAGTGTGATTGAGCCTCGGACATTATCAGGAAGGCTTCAGGAGCCATAAATGAGAAGGCTCGACCTCCTTTAGTAGACTTTTCTAGTCTGGGTACTAGCAGAAGCCCTGAGTTTGTGCGTCTGAAGGTGTGCTGGGTGTGTTTTCAGCACGAGAGGAGCACTTAAGTCATGTTTTTTCTCTGTGTTGCAGGAAAACCTCACAGTATCGAGAGCTCGGAGCGAATCCAGCTATCTGGGACGTATAACGTGCGG
AAGGGAAAGCTGCAGCTCCCGGTGAACCGCTGGAGCCGCCGGCAGGTCATTTTATGCGGCACGTGTCTGATGGTGTCCTCGGTGAAGGCCAGCCATACGG/- GGAAGATGCACATCCTGCCCCTGATTGGAGGAAAGGTACTGAACCCTGCGTATTATTATTATTATTATTATTATACATATTAACTTTATTAAACACTCATAATGAGTGCACGATGAGGACAGAGGAAGAGCCGGGACACACCAAGAGTTCTTTCAGGACTCTCATCAAGATTCTTCATGTTCATCTTCAACGCCTCCTCCTTCATGCTCAATAATGTTGATATCTGGTGACTGGGCTGGCCAATCCTTTGATGTGGAGGCTGAAGTATGAGGAGGAGCGCTATCCTGCTGGAGAATTGTCCCTCTCCTGTCATCCTGTGGTTCTTCTCCAAATGTCTTGATAGCTCAGGCTGTTGATGTTGCAGATCTCTCGCACGCCCCCATACTGACTGAACCCCAAACCATGACTTCTCCTTTACCAAACTTGACTGATTTCTGTGAGAATCTTGGTCTATGCTGGTTCCAGTTGGTCTTCTGCAGTATTGGTGATGATTGGGATGC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations