Genomic Feature
zh7
- ID
- ZDB-ALT-230821-6
- Name
- zh7
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Neuhauss Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 25: 37397684 - 37397696 (GRCz11) (1) Details
- Nucleotide change
- AAGTCGAGCGGCC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 13 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
CCTCACACACACACACACACACACACACGCACACACACACACACACACACACGCACACACACACACACACACACACACACTAATGCTGCACAATAATATCAGACAGTGCATACTGGCCTCCTCACACAGCTTCATCACACACACCACACACATCGTTCAGCAGTGCATATATCTGCATGATGCCAGTCTTCACTTCTCAGGTGTGATTATGGGCGCCGTGTCGGGAATGCTGCTGCGTGTGGCGTCTCCCATCGATGACAACATTGTGATGGTGATCGCCTTCCCTGGAGATATCCTGATGAGGATGCTGAAGATGCTGATCCTGCCCTTGATCATCTCCAGTCTCATCACAGGTAACACACACACACACACACACACACACATGAGAGTATCCTGAGAGCACAGTGTGCAGATCTTCCTCTCTGATCAGTCTGATGCAGTCGTATGGGAACTGACGTGCTGTGTGTCTCCTGACTCCAGGTCTGGCTGGTCTGGATGCC
AAGTCGAGCGGCC/- GTCTGGGCTCCAGAGCCATGATCTACTACATGACCACCACAGTGATCGCAGCGGTGCTGGGGGTCATCCTGGTGCTGCTCATCCACCCCGGGAACCCCAAACTCAAGGAGAATCTGGGAGAAGGACTCGAGAACGACGAGGTGTCCAGTCTGGACGCTTTCTTTGACCTGATCAGAAACCTGTTCCCCGAGAACCTGGTCCAGGCCTGTTTCCAGCAGGTGAAACCTCCAGACACACACCACACGCCAACTGTCAACGGCACGAGCATCTTAAAATAATAATAGTAATAATAATAATAATAATATTAATAAAATAATAATAATGATAATAATAATAATAATAATAATAATAATAATAATAATAATGATAATAATAATAATAATAATAATAATAATGATAATAATAATAATGATAATGATAATAAAATAATAATAATGATAATGATAATAATAATAATAAAATAATAATAATAATATTGATAATAATAATGATAATGATAA - Additional Sequence
- None
Fish
Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
---|---|---|---|---|---|
slc1a2bzh7/zh7 | Homozygous | ♀+/- ♂+/- | 2 figures ![]() | Fig. 5 ![]() | |
slc1a2bzh7/+ | Heterozygous | ♀+/- ♂+/- | 2 figures ![]() | ||
slc1a2bzh7/+; cu3313Tg | Complex | ||||
slc1a2bzh7/+; jf4Tg | Complex | Fig. 2 ![]() | Fig. 2 ![]() | ||
slc1a2bzh7/+; nkUAShspzGCaMP6s13aTg; nw7Tg | Complex | Fig. 5 ![]() | Fig. 5 ![]() | ||
slc1a2bzh7/+; zf498Tg | Complex | Fig. 4 ![]() | |||
slc1a2bzh7/zh7; cu3313Tg | Complex | Fig. 3 ![]() | Fig. 3 ![]() | ||
slc1a2bzh7/zh7; jf4Tg | Complex | Fig. 2 ![]() | Fig. 2 ![]() | ||
slc1a2bzh7/zh7; nkUAShspzGCaMP6s13aTg; nw7Tg | Complex | Fig. 5 ![]() | Fig. 5 ![]() | ||
slc1a2bzh7/zh7; zf498Tg | Complex | Fig. 4 ![]() | Fig. 4 ![]() |
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Supplemental Information
- Genotyping protocol
- None
- Myren-Svelstad, S., Jamali, A., Ophus, S.S., D'gama, P.P., Ostenrath, A.M., Mutlu, A.K., Hoffshagen, H.H., Hotz, A.L., Neuhauss, S.C.F., Jurisch-Yaksi, N., Yaksi, E. (2022) Elevated photic response is followed by a rapid decay and depressed state in ictogenic networks. Epilepsia. 63:2543-2560
- Özsoy, Ç., Hotz, A.L., Rieser, N.N., Chen, Z., Deán-Ben, X.L., Neuhauss, S.C.F., Razansky, D. (2022) Volumetric optoacoustic neurobehavioral tracking of epileptic seizures in freely-swimming zebrafish larvae. Frontiers in molecular neuroscience. 15:1004518
- Hotz, A.L., Jamali, A., Rieser, N.N., Niklaus, S., Aydin, E., Myren-Svelstad, S., Lalla, L., Jurisch-Yaksi, N., Yaksi, E., Neuhauss, S.C.F. (2021) Loss of glutamate transporter eaat2a leads to aberrant neuronal excitability, recurrent epileptic seizures, and basal hypoactivity. Glia. 70(1):196-214
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