Genomic Feature

ulg079

ID
ZDB-ALT-230821-3
Name
ulg079
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Martial Lab
Current Source
Other Pages
Notes
Comment Citation
Deletion in exon 2; primers for genome PCR amplification; Forward:  ... Zebrafish Nomenclature Committee
Genome Browser
Genome Build: GRCz11Chromosome: 13
Variants
Variant Type
Small Deletion
Variant Location
Chr 13: 37041143 - 37041173 (GRCz11) (1) Details
Nucleotide change
CTCACTCTCTGCACTGCCCGCCTCCGCTGGC/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
31 bp deleted in Exon 2 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
None
Sequences
Flanking Sequence
ATTAAAAAAAGCATAGTTTTGATAAGTATAATGTACTCTTTTTTAAATTTTCTTAAAAAAACCAACTAAAAGCAAAAGTCATACTGACCCCAAACCTTTGAACGCTAGTGTGTGTGCCTAACAGGCAGTGTTTTTCTTCCTCTGACACAGTTGGGCCTGAGATGCAGTAGTGTGTCAGGCCAGGGTCTCTCTTGTGTTCTCCAGCATGAGCTCCTCCCCTGGACCTGCCCCTGTCCTGGACTCCAGCAAGGCCGATCGAGGGGCCTCGCCTGCCCTCTTACCCCGGCTCTACGCCTCCCCGCTCGGCATGGACAACCAGACCGTCTGCATTCCTTCCCCATATGTGGAGGCCTGTCAGGATTACTCTCCACCGCATGGGGGAGAGTTCAACCACGGAGCCCTAACGCTCTACAGCCCCGTCTCCTCTGCAGTGCTCGGCTTCCATCGTCCTCCTGTGTCCGAAAGCCTCGTCCCGCTTAGTCCCACAATCCTGTGGCCGC
CTCACTCTCTGCACTGCCCGCCTCCGCTGGC/- CTACAGCGAAACACGTTCACACAGCGCCTGGGAGGAGGCCAAGACACACACGCTCAGCCAGAGCAGGTGAGAATAACTCAGTCTTTAAAAATAAGTCAGACTTTTAGTCCAGACTTATAAATAACTCAGACGTTCATATGAACTCAGACATTTATTATAACTCAGACTTTCATTTAGTCTTTAGGTGGCAGCTGTCACATGTATCTTTTGGTTGCCACAGAAACAGTAACAGCTTTGTAATGACATAAAATGTTTGTTTTTTTAATCACCTTAGCTGTTTGTTTTTTAGTTTCTTAAAATGTGTTATTTTTGGTCGTTTTTTTAATCATCTTTAATCAACTTGTTGAGAAGGTTATTTTTTTTTAGGACAGACAATAAAAACATTAGGAAGACTCAGAGTCTTTTCAGAATTGCAATCCTGACTCTAAGATTTGGTCATATTTGACACTTGCACATACACCTGGCGCAGTAAGGCACAAGATGTGTTTGACGCAATTTGT
Additional Sequence
None
Fish
Fish Genomic Feature Zygosity Parental Zygosity Affected Genomic Regions Phenotype Gene Expression
esr2bulg079/ulg079 (AB)Homozygous♀+/- ♂+/-4 figures with image from Guerrero-Limón et al., 2024
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Supplemental Information
Genotyping protocol
None
Citations
TSV
1 - 1 of 1
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