Genomic Feature
umo38
- ID
- ZDB-ALT-230131-1
- Name
- umo38
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Wei Ge Lab
- Current Source
- China Zebrafish Resource Center (CZRC) ( order this )
- Other Pages
-
Notes
| Comment | Citation |
|---|---|
| Chromosome 4, deletion of TAGA(4 bp) at 281 bp. Premature stop codon at amino ... | Zebrafish Nomenclature Committee |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 4: 19032100 - 19032103 (GRCz11) (1) Details
- Nucleotide change
- TCTA/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 4 bp deleted in Exon 2 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TTAAAAAAACAAAAGTGCATACAATCTTTACAATCCTTCTTCTTACAGTATATAACACATATTATAACACAATCCACAACTACAGGCAAGTTGGAATTATCAGTGCTATGTTGTAATATCAAAAATATAGCTTAGAAAATAGAAAGCTGCAGCACTAACATAAAAACTGAGAACTAAACAAGTGAAATAAGTTAAATAATTTAGAGAACTAGTCCTTGCATGTGCCATTGTGTTTTAAAAGTGATGCATAGAAGTAACAATGCATGGCTTACACATTTCAGAGAATGAATGTCTCAGCCACATCTGTATCTTTGCAGTATTTCAGTTTGTCTATGTTGAGGCAGAGCTTCTCCAGGAACCTCTGGAGCTCCAGGAGGTGCAGGTAGTTGGAGGTGACGGGGAAGGCTGTTTCTTCTTTATGCACCGGGGTCTCGGGATTGGGTAGAGGGCATCCCTGTGAGACGGCCAGTTCCTCCAGTGTCCTCAGGAGAGTCTCTAAG
TCTA/- TCTGGACCTGCTGTAGGTGCTGAGCTGGAGGAACATGCAACCGCAACTGCAGGTAACTCAAGTAACTCAAGACAGAACTGAGACCATCAATGGGGTTGTCGATGTCAGGGCCGAAATCAATCTCTGGAGACATCTGGAAGTGCTAGAGAGATATGCAGATGTTACTGATTGTAATTGTTATGTGTTTTTATATGTAGTTGACGTTCAAACTATTAGTGGAATTTAGTCATTGATCATTCTGCTGTGGTGACTCTTGATAAATCAAGAACTAAGCTGATGGAAAATGAATGAATGAATAAAAAATGTATCATTTAATTAGAAAGGCCAAGAACCAAGAGCCTTTTTTCCCAACATTTTTAAACAACATAGTTTTAAAAACTAATTAGTTTTTGCCATAGAGTTAAAACATATTTTTTTTTTACCTGTTATTTTAGTAGTTATTTATACTAGATATTTTACTAGTCATTATACTAGTATTTGGCTTAAAGTGCAAATGAAAG - Additional Sequence
- None
Fish
| Fish | Genomic Feature Zygosity | Parental Zygosity | Affected Genomic Regions | Phenotype | Gene Expression |
|---|---|---|---|---|---|
| lepbumo38/umo38 (AB) | Homozygous | ♀+/- ♂+/- | Fig. 1 from Hu et al., 2022 | ||
| lepbumo38/+ (AB) | Heterozygous | ♀+/- ♂+/- | Fig. 1 from Hu et al., 2022 | ||
| lepaumo37/+; lepbumo38/+ (AB) | Complex | 2 figures from Hu et al., 2022 | |||
| lepaumo37/+; lepbumo38/+ (AB) | Complex | Fig. 5 from Hu et al., 2022 | |||
| lepaumo37/+; lepbumo38/umo38 (AB) | Complex | 2 figures from Hu et al., 2022 | |||
| lepaumo37/+; lepbumo38/umo38 (AB) | Complex | Fig. 5 from Hu et al., 2022 | |||
| lepaumo37/umo37; lepbumo38/+ (AB) | Complex | Fig. 5 from Hu et al., 2022 | |||
| lepaumo37/umo37; lepbumo38/+ (AB) | Complex | 2 figures from Hu et al., 2022 | |||
| lepaumo37/umo37; lepbumo38/umo38 (AB) | Complex | Fig. 5 from Hu et al., 2022 | |||
| lepaumo37/umo37; lepbumo38/umo38 (AB) | Complex | 2 figures from Hu et al., 2022 |
1 - 10 of 11
Show
Supplemental Information
- Genotyping protocol
- None