Genomic Feature
re27
- ID
- ZDB-ALT-220920-1
- Name
- re27
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one insertion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Emma de Pater Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Insertion
- Variant Location
- Chr 6: 40796056 - 40796057 (GRCz11) (1) Details
- Nucleotide change
- -/GGTGAGGGATGCCGGGAAGTGAGGGATG
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 28 bp inserted in Exon 3 (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
CACACAATTGTTCCAAATCAGTCAACTTGTCAATCACTTTTAATTTTTGCGATTTAAAACATTTTTGAGCTTCCTCAGTGGACTGCGTGTAGACAAGCCTATTTATCCAGCCTAGTTTAACATCGTGATTAAACATGCAAAACTGAACTGACTTTGGCAATGCACGTGTAAGACTATAACTTTTTTTCTTTTTGCCAGCACGCCTTACGGGTGGCTCAATGTGTCGACCTCACCTTATCAACACTCACGGTCTTCCTTTACTGGACAACAGCAAATCGACCTTTTCTACAGCTCAGCACCACGGCTCATGGACCGTCAGCCACCTGGGCAAAGCGGTTCTGCATTCAGCAGGCGCCGAATCCTCCAACGGCCTGTACGCAGGCACCGGTGCGCCGGCCTCGGGTCCGATGCCGTGCCTGTCGATGACGCAACACTGCAGCGCACAGCTCTACTGCCTGCCGCCCACCCCGCCCAAAGATGTGTCCCCGGACCCGGCCTGTG
-/GGTGAGGGATGCCGGGAAGTGAGGGATG CCGCGGTGAGGGATGCCGGGAAGTACCATCTCCATCTAGTCGACGGGATGAAGATGGAGTGCTCCAGTCCAATCCGTAGCAACCCGCATCTGGCGCAAACGACAACCCCTATACCTTCATATCCCGATTACTCAGTAGCCGGAGCGCACGAGTATCCCGCCAGTGTGTTCCACTCCAGAAATCTGCTCGGAAACATGACGACAAAATGCAAAAGTAAAAACCGCGCTTTCTCTGGTGAGTTCAGATTTCATAGCGGAAACTACAAAAGGTAATAATCAGTCCAAAGTTAGCCTTTTATTTTCTATATATTAGCAAGTACTGAATGATGAAGATGTTATACTTTTGAATCAATGCAAAGCATGAGAAGACGCAATGCAATGAATTGCAGTATTTGTAAATGTAATAACATGATAAGCAGGTTTAATTTTGACACCAATATTTAAATAAAAATGCACTAGTTACTAAATAAACTATTAATAATTATAATGACATAAATAGGCT - Additional Sequence
- None
Fish
No data available
Supplemental Information
- Genotyping protocol
- None
- Gioacchino, E., Zhang, W., Koyunlar, C., Zink, J., de Looper, H., Gussinklo, K.J., Hoogenboezem, R., Bosch, D., Bindels, E., Touw, I.P., de Pater, E. (2024) GATA2 heterozygosity causes an epigenetic feedback mechanism resulting in myeloid and erythroid dysplasia. British journal of haematology. 205(2):580-593
- Koyunlar, C., Gioacchino, E., Vadgama, D., de Looper, H.W.J., Zink, J., Ter Borg, M., Hoogenboezem, R., Havermans, M., Sanders, M.A., Bindels, E., Dzierzak, E.A., Touw, I.P., de Pater, E. (2023) Gata2-regulated Gfi1b expression controls endothelial programming during endothelial-to-hematopoietic transition. Blood advances. 7(10):2082-2093
- Gioacchino, E., Koyunlar, C., Zink, J., de Looper, H., de Jong, M., Dobrzycki, T., Mahony, C.B., Hoogenboezem, R., Bosch, D., van Strien, P.M.H., van Royen, M.E., French, P.J., Bindels, E., Gussinklo, K.J., Monteiro, R., Touw, I.P., de Pater, E. (2021) Essential role for Gata2 in modulating lineage output from hematopoietic stem cells in zebrafish. Blood advances. 5:2687-2700
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