Genomic Feature
gf1
- ID
- ZDB-ALT-220711-2
- Name
- gf1
- Synonyms
-
- pex2-typeB (1)
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Takashima Lab
- Current Source
- Other Pages
-
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 24: 23213157 - 23213167 (GRCz11) (1) Details
- Nucleotide change
- GCCGGCCCAAG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 11 bp deleted from position 23213157 to 23213167 in Exon 2 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
CCTAAAGTATTGAAAGAAAGAAAAAAGATTTTGAGATGTTTCCTGCAATTTTCATAAGCCAATTTATTTCAGATATTGTCCAAATCCCATCCTAAGCTAAGAGGTGGTCACCACAGCCCCTGGCTCTCATTTTTTAACCATTGCATTTAAAGAGATAAACCCAGGCCGATACAAACGCATTCCATGAAAAATTGCCAAACGTCACAGTTCTTAGATCCCTTATAAAAAGCCGTCAAAGTAAAGTAGTTCCACATAGCGGATGTTTACTGCCTTTCCAAGCCTGTGCTGTTGGGATAATCTCCTGTGATGTGATTTGTCCTCGAACTGAATCTCGAGAGGGAACAGCATAAGACCTCCTGTGCCTCTGCCCTGCACAGCTAAAAGGGAATTTAGGATGGGTTTTACATGTGAAAAGTGATTTCAACTCAAATGCAAAAATGCATAACCATTTCCTTCTTCTGCTTGTAGCTGGAGCTGGAGGTGACAAGCCTTTCGCCAAG
GCCGGCCCAAG/- CCCTTTATCTCGGGTTTTGAGAATCAGTCAGCTGGATGCTTTTGAACTGGATGGTGCACTGGAACAGCTTGTTTGGTCACAGTTCACCCAATGTTTCCAGCATTTTAAACCTGGGATCTTAACCCCTGTGGAACCAGAACTCAAAGCGCTTCTCCAGCTCCTCCTGTGGAGGTTCACCATCTACTCCAACAGTGCCACCGTGGGCCAGTCACTGCTCAACATTCGGTACAAGAATGCACTGATCCCGGGACAGAAATACCGGCCCATGAGTCGGCCACAGAAGTTTTGGTTTGCTTTGCTGACGGTGGGTGAAAAGTGGTTTAGAGAGCGCTCCCATAGCTTGTTTCTCAACCACCCAGCAGAGTCCAACGCTCGCAAAGCCCGTAAAGTACTCAGCATCTTGTTGGGCCTCACCAAAGCGGCCAGCCTGGTCAACTTCCTACTTTTCCTCCAAAGAGGAACCTTTCCGACCCTTACCGAAAGATTGTTGGGAGTGCAGC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None